Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 AL583810.1-201ENST00000553344 1045 ntBASIC15.21■□□□□ 0.03
RFC1P35251 AL160314.3-201ENST00000556041 767 ntBASIC15.21■□□□□ 0.03
RFC1P35251 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC15.21■□□□□ 0.03
RFC1P35251 AC005730.2-201ENST00000564549 1184 ntBASIC15.21■□□□□ 0.03
RFC1P35251 RN7SL560P-201ENST00000577943 264 ntBASIC15.21■□□□□ 0.03
RFC1P35251 KLK11-210ENST00000600362 759 ntTSL 3 BASIC15.21■□□□□ 0.03
RFC1P35251 AC009884.2-201ENST00000603110 324 ntBASIC15.21■□□□□ 0.03
RFC1P35251 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
RFC1P35251 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
RFC1P35251 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
RFC1P35251 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RFC1P35251 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RFC1P35251 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC15.21■□□□□ 0.03
RFC1P35251 AC144522.1-201ENST00000625111 1658 ntBASIC15.21■□□□□ 0.03
RFC1P35251 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
RFC1P35251 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RFC1P35251 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC15.21■□□□□ 0.03
RFC1P35251 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RFC1P35251 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RFC1P35251 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
RFC1P35251 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
RFC1P35251 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
RFC1P35251 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
RFC1P35251 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RFC1P35251 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
RFC1P35251 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC15.21■□□□□ 0.02
RFC1P35251 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
RFC1P35251 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
RFC1P35251 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RFC1P35251 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
RFC1P35251 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RFC1P35251 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RFC1P35251 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC15.2■□□□□ 0.02
RFC1P35251 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RFC1P35251 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
RFC1P35251 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
RFC1P35251 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC15.2■□□□□ 0.02
RFC1P35251 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
RFC1P35251 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RFC1P35251 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC15.2■□□□□ 0.02
RFC1P35251 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RFC1P35251 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RFC1P35251 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RFC1P35251 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RFC1P35251 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RFC1P35251 NDUFAB1P1-201ENST00000404262 460 ntBASIC15.2■□□□□ 0.02
RFC1P35251 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC15.2■□□□□ 0.02
RFC1P35251 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC15.2■□□□□ 0.02
RFC1P35251 GOLGA2P4-201ENST00000441462 777 ntBASIC15.2■□□□□ 0.02
RFC1P35251 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RFC1P35251 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RFC1P35251 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RFC1P35251 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC15.2■□□□□ 0.02
RFC1P35251 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RFC1P35251 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RFC1P35251 AL096828.3-201ENST00000615354 462 ntBASIC15.2■□□□□ 0.02
RFC1P35251 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
RFC1P35251 RPL35-206ENST00000629845 340 ntTSL 5 BASIC15.2■□□□□ 0.02
RFC1P35251 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC15.2■□□□□ 0.02
RFC1P35251 FUK-202ENST00000378912 3925 ntTSL 2 BASIC15.2■□□□□ 0.02
RFC1P35251 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.2■□□□□ 0.02
RFC1P35251 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC15.2■□□□□ 0.02
RFC1P35251 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RFC1P35251 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
RFC1P35251 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
RFC1P35251 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
RFC1P35251 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RFC1P35251 AL359881.3-201ENST00000602640 1721 ntBASIC15.2■□□□□ 0.02
RFC1P35251 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RFC1P35251 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RFC1P35251 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RFC1P35251 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
RFC1P35251 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RFC1P35251 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
RFC1P35251 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC15.19■□□□□ 0.02
RFC1P35251 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC15.19■□□□□ 0.02
RFC1P35251 MBLAC2-202ENST00000514906 1936 ntBASIC15.19■□□□□ 0.02
RFC1P35251 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RFC1P35251 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RFC1P35251 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
RFC1P35251 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
RFC1P35251 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC15.19■□□□□ 0.02
RFC1P35251 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
RFC1P35251 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
RFC1P35251 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RFC1P35251 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
RFC1P35251 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RFC1P35251 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC15.19■□□□□ 0.02
RFC1P35251 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RFC1P35251 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RFC1P35251 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RFC1P35251 GK-202ENST00000378941 458 ntTSL 3 BASIC15.19■□□□□ 0.02
RFC1P35251 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC15.19■□□□□ 0.02
RFC1P35251 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC15.19■□□□□ 0.02
RFC1P35251 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC15.19■□□□□ 0.02
RFC1P35251 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RFC1P35251 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC15.19■□□□□ 0.02
RFC1P35251 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
RFC1P35251 FAM86HP-204ENST00000513466 959 ntBASIC15.19■□□□□ 0.02
RFC1P35251 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms