Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
CKS2P33552 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
CKS2P33552 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC10.65□□□□□ -0.7
CKS2P33552 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC10.65□□□□□ -0.71
CKS2P33552 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.71
CKS2P33552 PNPLA7-202ENST00000406427 4806 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
CKS2P33552 LRRC57-201ENST00000323443 7351 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
CKS2P33552 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.71
CKS2P33552 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
CKS2P33552 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
CKS2P33552 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
CKS2P33552 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC10.65□□□□□ -0.71
CKS2P33552 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.71
CKS2P33552 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
CKS2P33552 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
CKS2P33552 ZNF259P1-201ENST00000407656 1365 ntBASIC10.65□□□□□ -0.71
CKS2P33552 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC10.64□□□□□ -0.71
CKS2P33552 GMPS-203ENST00000496455 8751 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CKS2P33552 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CKS2P33552 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CKS2P33552 TMEM246-202ENST00000374848 4244 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CKS2P33552 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
CKS2P33552 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC10.64□□□□□ -0.71
CKS2P33552 TUBB3P1-201ENST00000405796 1332 ntBASIC10.64□□□□□ -0.71
CKS2P33552 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CKS2P33552 AL138799.1-201ENST00000448213 1675 ntBASIC10.64□□□□□ -0.71
CKS2P33552 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CKS2P33552 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
CKS2P33552 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC10.64□□□□□ -0.71
CKS2P33552 BTBD3-204ENST00000405977 5137 ntAPPRIS P4 TSL 5 BASIC10.64□□□□□ -0.71
CKS2P33552 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC10.64□□□□□ -0.71
CKS2P33552 F2-205ENST00000530231 1849 ntTSL 5 BASIC10.64□□□□□ -0.71
CKS2P33552 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CKS2P33552 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CKS2P33552 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC10.64□□□□□ -0.71
CKS2P33552 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC10.64□□□□□ -0.71
CKS2P33552 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC10.64□□□□□ -0.71
CKS2P33552 AL080243.2-201ENST00000418783 582 ntBASIC10.64□□□□□ -0.71
CKS2P33552 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC10.64□□□□□ -0.71
CKS2P33552 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC10.64□□□□□ -0.71
CKS2P33552 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC10.64□□□□□ -0.71
CKS2P33552 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC10.64□□□□□ -0.71
CKS2P33552 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC10.64□□□□□ -0.71
CKS2P33552 KRT18P3-201ENST00000451602 1288 ntBASIC10.64□□□□□ -0.71
CKS2P33552 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC10.64□□□□□ -0.71
CKS2P33552 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC10.64□□□□□ -0.71
CKS2P33552 PP7080-204ENST00000510714 601 ntTSL 3 BASIC10.64□□□□□ -0.71
CKS2P33552 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC10.64□□□□□ -0.71
CKS2P33552 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC10.64□□□□□ -0.71
CKS2P33552 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
CKS2P33552 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC10.64□□□□□ -0.71
CKS2P33552 TIMM17BP1-201ENST00000545713 516 ntBASIC10.64□□□□□ -0.71
CKS2P33552 RN7SL510P-201ENST00000581311 263 ntBASIC10.64□□□□□ -0.71
CKS2P33552 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC10.64□□□□□ -0.71
CKS2P33552 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
CKS2P33552 CAND2-206ENST00000626378 333 ntTSL 5 BASIC10.64□□□□□ -0.71
CKS2P33552 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC10.64□□□□□ -0.71
CKS2P33552 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC10.64□□□□□ -0.71
CKS2P33552 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC10.64□□□□□ -0.71
CKS2P33552 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CKS2P33552 OR1I1-202ENST00000641398 5984 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
CKS2P33552 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
CKS2P33552 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
CKS2P33552 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
CKS2P33552 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC10.64□□□□□ -0.71
CKS2P33552 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CKS2P33552 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC10.64□□□□□ -0.71
CKS2P33552 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
CKS2P33552 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
CKS2P33552 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
CKS2P33552 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
CKS2P33552 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CKS2P33552 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
CKS2P33552 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC10.64□□□□□ -0.71
CKS2P33552 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CKS2P33552 POC1B-GALNT4-202ENST00000548729 5436 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
CKS2P33552 OGFR-202ENST00000370461 4506 ntAPPRIS ALT2 TSL 2 BASIC10.64□□□□□ -0.71
CKS2P33552 ATP13A2-203ENST00000452699 3981 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
CKS2P33552 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
CKS2P33552 IP6K1-202ENST00000395238 4117 ntTSL 3 BASIC10.64□□□□□ -0.71
CKS2P33552 PRICKLE1-216ENST00000640132 4278 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
CKS2P33552 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CKS2P33552 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CKS2P33552 TNFRSF21-201ENST00000296861 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CKS2P33552 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
CKS2P33552 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC10.63□□□□□ -0.71
CKS2P33552 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
CKS2P33552 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
CKS2P33552 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
CKS2P33552 SLC38A7-201ENST00000219320 4392 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
CKS2P33552 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
CKS2P33552 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC10.63□□□□□ -0.71
CKS2P33552 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC10.63□□□□□ -0.71
CKS2P33552 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC10.63□□□□□ -0.71
CKS2P33552 DIAPH2-201ENST00000324765 9333 ntAPPRIS P4 TSL 1 (best) BASIC10.63□□□□□ -0.71
CKS2P33552 GPR176-201ENST00000299092 3844 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
CKS2P33552 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC10.63□□□□□ -0.71
CKS2P33552 CAMKK2-205ENST00000392474 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
CKS2P33552 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
CKS2P33552 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC10.63□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms