Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
PTX3P26022 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC13.85□□□□□ -0.19
PTX3P26022 AL031595.1-201ENST00000623969 4709 ntBASIC13.85□□□□□ -0.19
PTX3P26022 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
PTX3P26022 LAP3P2-201ENST00000454686 1454 ntBASIC13.85□□□□□ -0.19
PTX3P26022 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PTX3P26022 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PTX3P26022 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PTX3P26022 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PTX3P26022 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
PTX3P26022 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
PTX3P26022 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC13.85□□□□□ -0.19
PTX3P26022 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PTX3P26022 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
PTX3P26022 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
PTX3P26022 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC13.84□□□□□ -0.19
PTX3P26022 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PTX3P26022 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PTX3P26022 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PTX3P26022 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
PTX3P26022 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
PTX3P26022 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC13.84□□□□□ -0.19
PTX3P26022 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC13.84□□□□□ -0.19
PTX3P26022 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC13.84□□□□□ -0.19
PTX3P26022 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PTX3P26022 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PTX3P26022 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PTX3P26022 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PTX3P26022 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PTX3P26022 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
PTX3P26022 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PTX3P26022 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC13.84□□□□□ -0.19
PTX3P26022 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC13.84□□□□□ -0.19
PTX3P26022 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC13.84□□□□□ -0.19
PTX3P26022 Z93015.1-201ENST00000451718 390 ntBASIC13.84□□□□□ -0.19
PTX3P26022 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC13.84□□□□□ -0.19
PTX3P26022 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PTX3P26022 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC13.84□□□□□ -0.19
PTX3P26022 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC13.84□□□□□ -0.19
PTX3P26022 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC13.84□□□□□ -0.19
PTX3P26022 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PTX3P26022 AC124068.2-201ENST00000569473 1109 ntBASIC13.84□□□□□ -0.19
PTX3P26022 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC13.84□□□□□ -0.19
PTX3P26022 KLK11-210ENST00000600362 759 ntTSL 3 BASIC13.84□□□□□ -0.19
PTX3P26022 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PTX3P26022 RPL35-206ENST00000629845 340 ntTSL 5 BASIC13.84□□□□□ -0.19
PTX3P26022 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC13.84□□□□□ -0.19
PTX3P26022 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PTX3P26022 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PTX3P26022 TCAF1P1-201ENST00000414990 2232 ntBASIC13.84□□□□□ -0.19
PTX3P26022 AC144522.1-201ENST00000625111 1658 ntBASIC13.84□□□□□ -0.19
PTX3P26022 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PTX3P26022 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PTX3P26022 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
PTX3P26022 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PTX3P26022 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC13.84□□□□□ -0.19
PTX3P26022 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PTX3P26022 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PTX3P26022 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
PTX3P26022 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
PTX3P26022 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.19
PTX3P26022 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
PTX3P26022 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.19
PTX3P26022 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
PTX3P26022 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC13.83□□□□□ -0.2
PTX3P26022 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PTX3P26022 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
PTX3P26022 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
PTX3P26022 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PTX3P26022 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PTX3P26022 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PTX3P26022 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
PTX3P26022 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
PTX3P26022 OR8S1-201ENST00000310194 1080 ntBASIC13.83□□□□□ -0.2
PTX3P26022 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PTX3P26022 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
PTX3P26022 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PTX3P26022 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PTX3P26022 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC13.83□□□□□ -0.2
PTX3P26022 OLR1-203ENST00000432556 950 ntTSL 2 BASIC13.83□□□□□ -0.2
PTX3P26022 MTX1P1-201ENST00000440904 838 ntBASIC13.83□□□□□ -0.2
PTX3P26022 ATP6V0CP2-201ENST00000469409 207 ntBASIC13.83□□□□□ -0.2
PTX3P26022 AC021723.1-201ENST00000486306 515 ntBASIC13.83□□□□□ -0.2
PTX3P26022 USB1-203ENST00000539737 1212 ntTSL 2 BASIC13.83□□□□□ -0.2
PTX3P26022 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC13.83□□□□□ -0.2
PTX3P26022 AL160314.3-201ENST00000556041 767 ntBASIC13.83□□□□□ -0.2
PTX3P26022 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC13.83□□□□□ -0.2
PTX3P26022 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC13.83□□□□□ -0.2
PTX3P26022 AC005962.1-201ENST00000584100 773 ntBASIC13.83□□□□□ -0.2
PTX3P26022 MIR4259-201ENST00000584466 101 ntBASIC13.83□□□□□ -0.2
PTX3P26022 IFT20-216ENST00000588477 774 ntTSL 5 BASIC13.83□□□□□ -0.2
PTX3P26022 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC13.83□□□□□ -0.2
PTX3P26022 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC13.83□□□□□ -0.2
PTX3P26022 AL023803.2-201ENST00000620080 638 ntBASIC13.83□□□□□ -0.2
PTX3P26022 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC13.83□□□□□ -0.2
PTX3P26022 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
PTX3P26022 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PTX3P26022 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PTX3P26022 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC13.83□□□□□ -0.2
PTX3P26022 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms