Protein–RNA interactions for Protein: P21709

EPHA1, Ephrin type-A receptor 1, humanhuman

Predictions only

Length 976 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA1P21709 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
EPHA1P21709 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
EPHA1P21709 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC12.5□□□□□ -0.41
EPHA1P21709 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
EPHA1P21709 MPV17-205ENST00000402310 906 ntTSL 5 BASIC12.5□□□□□ -0.41
EPHA1P21709 AL035696.2-201ENST00000407941 709 ntBASIC12.5□□□□□ -0.41
EPHA1P21709 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC12.5□□□□□ -0.41
EPHA1P21709 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC12.5□□□□□ -0.41
EPHA1P21709 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
EPHA1P21709 GAPDHP40-201ENST00000505218 1006 ntBASIC12.5□□□□□ -0.41
EPHA1P21709 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
EPHA1P21709 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC12.5□□□□□ -0.41
EPHA1P21709 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC12.5□□□□□ -0.41
EPHA1P21709 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC12.5□□□□□ -0.41
EPHA1P21709 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC12.5□□□□□ -0.41
EPHA1P21709 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC12.5□□□□□ -0.41
EPHA1P21709 NAT9-222ENST00000583476 583 ntTSL 3 BASIC12.5□□□□□ -0.41
EPHA1P21709 EEF1DP1-201ENST00000585891 896 ntBASIC12.5□□□□□ -0.41
EPHA1P21709 AL008638.5-201ENST00000623814 1298 ntBASIC12.5□□□□□ -0.41
EPHA1P21709 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC12.5□□□□□ -0.41
EPHA1P21709 AC244452.3-201ENST00000636814 210 ntBASIC12.5□□□□□ -0.41
EPHA1P21709 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC12.5□□□□□ -0.41
EPHA1P21709 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
EPHA1P21709 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
EPHA1P21709 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC12.5□□□□□ -0.41
EPHA1P21709 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
EPHA1P21709 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
EPHA1P21709 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
EPHA1P21709 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
EPHA1P21709 ZBTB45P1-201ENST00000452761 1456 ntBASIC12.5□□□□□ -0.41
EPHA1P21709 AL354989.2-201ENST00000435838 1540 ntBASIC12.5□□□□□ -0.41
EPHA1P21709 AC007787.1-201ENST00000588095 1583 ntBASIC12.5□□□□□ -0.41
EPHA1P21709 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC12.5□□□□□ -0.41
EPHA1P21709 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
EPHA1P21709 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC12.5□□□□□ -0.41
EPHA1P21709 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
EPHA1P21709 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
EPHA1P21709 AC092135.3-201ENST00000624151 1846 ntBASIC12.5□□□□□ -0.41
EPHA1P21709 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
EPHA1P21709 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
EPHA1P21709 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
EPHA1P21709 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
EPHA1P21709 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC12.5□□□□□ -0.41
EPHA1P21709 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
EPHA1P21709 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
EPHA1P21709 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
EPHA1P21709 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
EPHA1P21709 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
EPHA1P21709 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
EPHA1P21709 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
EPHA1P21709 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
EPHA1P21709 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
EPHA1P21709 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
EPHA1P21709 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
EPHA1P21709 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
EPHA1P21709 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
EPHA1P21709 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
EPHA1P21709 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC12.49□□□□□ -0.41
EPHA1P21709 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
EPHA1P21709 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC12.49□□□□□ -0.41
EPHA1P21709 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
EPHA1P21709 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC12.49□□□□□ -0.41
EPHA1P21709 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
EPHA1P21709 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC12.49□□□□□ -0.41
EPHA1P21709 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
EPHA1P21709 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC12.49□□□□□ -0.41
EPHA1P21709 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
EPHA1P21709 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
EPHA1P21709 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
EPHA1P21709 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
EPHA1P21709 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
EPHA1P21709 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
EPHA1P21709 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC12.49□□□□□ -0.41
EPHA1P21709 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC12.49□□□□□ -0.41
EPHA1P21709 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
EPHA1P21709 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
EPHA1P21709 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
EPHA1P21709 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
EPHA1P21709 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
EPHA1P21709 AL645937.2-201ENST00000396808 931 ntBASIC12.49□□□□□ -0.41
EPHA1P21709 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC12.49□□□□□ -0.41
EPHA1P21709 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
EPHA1P21709 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC12.49□□□□□ -0.41
EPHA1P21709 CALR4P-201ENST00000431943 946 ntBASIC12.49□□□□□ -0.41
EPHA1P21709 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
EPHA1P21709 HOMER2P2-201ENST00000451621 847 ntBASIC12.49□□□□□ -0.41
EPHA1P21709 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC12.49□□□□□ -0.41
EPHA1P21709 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
EPHA1P21709 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC12.49□□□□□ -0.41
EPHA1P21709 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC12.49□□□□□ -0.41
EPHA1P21709 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
EPHA1P21709 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
EPHA1P21709 KLK3-211ENST00000597483 810 ntTSL 2 BASIC12.49□□□□□ -0.41
EPHA1P21709 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
EPHA1P21709 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
EPHA1P21709 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC12.49□□□□□ -0.41
EPHA1P21709 PPA1-206ENST00000625364 644 ntTSL 5 BASIC12.49□□□□□ -0.41
EPHA1P21709 AC006453.4-201ENST00000636949 1252 ntBASIC12.49□□□□□ -0.41
EPHA1P21709 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
EPHA1P21709 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms