Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC11.11□□□□□ -0.63
RAB4AP20338 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
RAB4AP20338 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC11.11□□□□□ -0.63
RAB4AP20338 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC11.11□□□□□ -0.63
RAB4AP20338 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC11.11□□□□□ -0.63
RAB4AP20338 TRIM40-207ENST00000396581 2086 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
RAB4AP20338 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
RAB4AP20338 SHMT2-201ENST00000328923 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
RAB4AP20338 RPH3A-202ENST00000415485 4452 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
RAB4AP20338 INPP5J-201ENST00000331075 3347 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
RAB4AP20338 TMPO-212ENST00000556029 4242 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
RAB4AP20338 IP6K3-201ENST00000293756 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
RAB4AP20338 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
RAB4AP20338 ARHGAP36-203ENST00000370922 2736 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
RAB4AP20338 CXorf38-203ENST00000378426 4895 ntTSL 2 BASIC11.11□□□□□ -0.63
RAB4AP20338 BEND6-202ENST00000370746 2379 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
RAB4AP20338 RPS6KA1-220ENST00000531382 2359 ntTSL 2 BASIC11.11□□□□□ -0.63
RAB4AP20338 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
RAB4AP20338 HECTD4-202ENST00000377560 15759 ntAPPRIS P5 TSL 5 BASIC11.11□□□□□ -0.63
RAB4AP20338 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
RAB4AP20338 DDX12P-201ENST00000432996 2947 ntBASIC11.11□□□□□ -0.63
RAB4AP20338 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC11.11□□□□□ -0.63
RAB4AP20338 BDP1-201ENST00000358731 11073 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
RAB4AP20338 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
RAB4AP20338 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
RAB4AP20338 TK2-206ENST00000527800 2687 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
RAB4AP20338 CAMTA2-202ENST00000361571 4777 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
RAB4AP20338 VDR-202ENST00000395324 4762 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
RAB4AP20338 CELF4-218ENST00000591287 3757 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
RAB4AP20338 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
RAB4AP20338 ZDHHC7-201ENST00000313732 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RAB4AP20338 AKAP8P1-201ENST00000434743 1349 ntBASIC11.1□□□□□ -0.63
RAB4AP20338 RNF219-AS1-209ENST00000606429 2418 ntTSL 2 BASIC11.1□□□□□ -0.63
RAB4AP20338 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RAB4AP20338 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
RAB4AP20338 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RAB4AP20338 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC11.1□□□□□ -0.63
RAB4AP20338 OSBP2-203ENST00000403222 3728 ntTSL 5 BASIC11.1□□□□□ -0.63
RAB4AP20338 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RAB4AP20338 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
RAB4AP20338 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
RAB4AP20338 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RAB4AP20338 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC11.1□□□□□ -0.63
RAB4AP20338 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC11.1□□□□□ -0.63
RAB4AP20338 TMEM199-201ENST00000292114 3148 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RAB4AP20338 TMEM220-201ENST00000341871 3106 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
RAB4AP20338 USP33-203ENST00000370793 4502 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
RAB4AP20338 LRTM2-208ENST00000543818 3986 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
RAB4AP20338 CEP41-201ENST00000223208 6513 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RAB4AP20338 SYK-204ENST00000375754 5005 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
RAB4AP20338 TCF3-202ENST00000344749 4289 ntTSL 5 BASIC11.1□□□□□ -0.63
RAB4AP20338 BAIAP2-AS1-202ENST00000577066 4465 ntTSL 2 BASIC11.1□□□□□ -0.63
RAB4AP20338 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RAB4AP20338 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC11.1□□□□□ -0.63
RAB4AP20338 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC11.1□□□□□ -0.63
RAB4AP20338 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC11.1□□□□□ -0.63
RAB4AP20338 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC11.1□□□□□ -0.63
RAB4AP20338 AC112191.1-201ENST00000523689 701 ntBASIC11.1□□□□□ -0.63
RAB4AP20338 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC11.1□□□□□ -0.63
RAB4AP20338 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
RAB4AP20338 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
RAB4AP20338 MAX-210ENST00000555419 765 ntTSL 5 BASIC11.1□□□□□ -0.63
RAB4AP20338 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC11.1□□□□□ -0.63
RAB4AP20338 AP002472.1-201ENST00000577490 586 ntBASIC11.1□□□□□ -0.63
RAB4AP20338 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC11.1□□□□□ -0.63
RAB4AP20338 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC11.1□□□□□ -0.63
RAB4AP20338 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC11.1□□□□□ -0.63
RAB4AP20338 AC099522.2-201ENST00000607001 744 ntBASIC11.1□□□□□ -0.63
RAB4AP20338 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC11.1□□□□□ -0.63
RAB4AP20338 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RAB4AP20338 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
RAB4AP20338 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC11.1□□□□□ -0.63
RAB4AP20338 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC11.1□□□□□ -0.63
RAB4AP20338 MARCH10-201ENST00000311269 3090 ntAPPRIS P3 TSL 2 BASIC11.1□□□□□ -0.63
RAB4AP20338 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RAB4AP20338 LILRP1-201ENST00000444199 1370 ntBASIC11.1□□□□□ -0.63
RAB4AP20338 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RAB4AP20338 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RAB4AP20338 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RAB4AP20338 MICAL1-208ENST00000630715 3678 ntTSL 2 BASIC11.1□□□□□ -0.63
RAB4AP20338 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC11.1□□□□□ -0.63
RAB4AP20338 MYO5B-201ENST00000285039 9505 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RAB4AP20338 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
RAB4AP20338 GLT8D2-201ENST00000360814 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RAB4AP20338 C2-209ENST00000452323 1999 ntTSL 2 BASIC11.1□□□□□ -0.63
RAB4AP20338 KMT2A-201ENST00000389506 13655 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
RAB4AP20338 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RAB4AP20338 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
RAB4AP20338 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
RAB4AP20338 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC11.09□□□□□ -0.63
RAB4AP20338 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
RAB4AP20338 HECW1-IT1-201ENST00000322220 1839 ntTSL 2 BASIC11.09□□□□□ -0.63
RAB4AP20338 RUNX1T1-227ENST00000520724 2103 ntTSL 2 BASIC11.09□□□□□ -0.63
RAB4AP20338 FAM196A-201ENST00000424811 3149 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
RAB4AP20338 PANK2-206ENST00000497424 4815 ntTSL 2 BASIC11.09□□□□□ -0.63
RAB4AP20338 PPFIA4-201ENST00000272198 5045 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
RAB4AP20338 L1CAM-202ENST00000361981 5004 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
RAB4AP20338 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC11.09□□□□□ -0.63
RAB4AP20338 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
RAB4AP20338 AL354702.1-201ENST00000442006 1960 ntBASIC11.09□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms