Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
HIST1H1DP16402 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HIST1H1DP16402 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
HIST1H1DP16402 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC12.26□□□□□ -0.45
HIST1H1DP16402 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC12.26□□□□□ -0.45
HIST1H1DP16402 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
HIST1H1DP16402 F2-205ENST00000530231 1849 ntTSL 5 BASIC12.26□□□□□ -0.45
HIST1H1DP16402 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC12.26□□□□□ -0.45
HIST1H1DP16402 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC12.26□□□□□ -0.45
HIST1H1DP16402 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC12.26□□□□□ -0.45
HIST1H1DP16402 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HIST1H1DP16402 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
HIST1H1DP16402 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
HIST1H1DP16402 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC12.26□□□□□ -0.45
HIST1H1DP16402 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC12.26□□□□□ -0.45
HIST1H1DP16402 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
HIST1H1DP16402 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC12.26□□□□□ -0.45
HIST1H1DP16402 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
HIST1H1DP16402 CDC23-208ENST00000505120 455 ntTSL 3 BASIC12.26□□□□□ -0.45
HIST1H1DP16402 AC093214.1-201ENST00000511688 1107 ntBASIC12.26□□□□□ -0.45
HIST1H1DP16402 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC12.26□□□□□ -0.45
HIST1H1DP16402 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
HIST1H1DP16402 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
HIST1H1DP16402 WDR88-203ENST00000592765 651 ntTSL 5 BASIC12.26□□□□□ -0.45
HIST1H1DP16402 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
HIST1H1DP16402 AC145423.3-201ENST00000615987 467 ntBASIC12.26□□□□□ -0.45
HIST1H1DP16402 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
HIST1H1DP16402 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
HIST1H1DP16402 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
HIST1H1DP16402 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
HIST1H1DP16402 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HIST1H1DP16402 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HIST1H1DP16402 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC12.26□□□□□ -0.45
HIST1H1DP16402 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC12.26□□□□□ -0.45
HIST1H1DP16402 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC12.26□□□□□ -0.45
HIST1H1DP16402 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC12.26□□□□□ -0.45
HIST1H1DP16402 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HIST1H1DP16402 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HIST1H1DP16402 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC12.26□□□□□ -0.45
HIST1H1DP16402 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
HIST1H1DP16402 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
HIST1H1DP16402 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HIST1H1DP16402 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
HIST1H1DP16402 BEND3P3-201ENST00000611030 2440 ntBASIC12.26□□□□□ -0.45
HIST1H1DP16402 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HIST1H1DP16402 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
HIST1H1DP16402 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
HIST1H1DP16402 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
HIST1H1DP16402 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC12.25□□□□□ -0.45
HIST1H1DP16402 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H1DP16402 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H1DP16402 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H1DP16402 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC12.25□□□□□ -0.45
HIST1H1DP16402 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H1DP16402 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H1DP16402 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H1DP16402 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H1DP16402 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
HIST1H1DP16402 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H1DP16402 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC12.25□□□□□ -0.45
HIST1H1DP16402 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H1DP16402 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
HIST1H1DP16402 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC12.25□□□□□ -0.45
HIST1H1DP16402 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H1DP16402 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H1DP16402 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H1DP16402 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H1DP16402 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H1DP16402 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H1DP16402 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H1DP16402 AC087499.6-201ENST00000411576 835 ntBASIC12.25□□□□□ -0.45
HIST1H1DP16402 GAS5-209ENST00000430245 723 ntTSL 3 BASIC12.25□□□□□ -0.45
HIST1H1DP16402 SPTLC1P1-201ENST00000447199 261 ntBASIC12.25□□□□□ -0.45
HIST1H1DP16402 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H1DP16402 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC12.25□□□□□ -0.45
HIST1H1DP16402 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC12.25□□□□□ -0.45
HIST1H1DP16402 IGHVIII-5-2-201ENST00000522505 261 ntBASIC12.25□□□□□ -0.45
HIST1H1DP16402 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H1DP16402 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC12.25□□□□□ -0.45
HIST1H1DP16402 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC12.25□□□□□ -0.45
HIST1H1DP16402 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC12.25□□□□□ -0.45
HIST1H1DP16402 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC12.25□□□□□ -0.45
HIST1H1DP16402 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H1DP16402 AC009118.2-201ENST00000613275 655 ntBASIC12.25□□□□□ -0.45
HIST1H1DP16402 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC12.25□□□□□ -0.45
HIST1H1DP16402 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H1DP16402 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
HIST1H1DP16402 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC12.25□□□□□ -0.45
HIST1H1DP16402 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC12.25□□□□□ -0.45
HIST1H1DP16402 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H1DP16402 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H1DP16402 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H1DP16402 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H1DP16402 MKRN5P-201ENST00000445263 1467 ntBASIC12.25□□□□□ -0.45
HIST1H1DP16402 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H1DP16402 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H1DP16402 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
HIST1H1DP16402 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
HIST1H1DP16402 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H1DP16402 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms