Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
MT-ND1P03886 TNRC18P1-201ENST00000502875 3650 ntBASIC13.66□□□□□ -0.22
MT-ND1P03886 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC13.66□□□□□ -0.22
MT-ND1P03886 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
MT-ND1P03886 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
MT-ND1P03886 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
MT-ND1P03886 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
MT-ND1P03886 MIEF2-201ENST00000323019 3364 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
MT-ND1P03886 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
MT-ND1P03886 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
MT-ND1P03886 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
MT-ND1P03886 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
MT-ND1P03886 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
MT-ND1P03886 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
MT-ND1P03886 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
MT-ND1P03886 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
MT-ND1P03886 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
MT-ND1P03886 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.66□□□□□ -0.22
MT-ND1P03886 SOCS2P1-201ENST00000417727 557 ntBASIC13.66□□□□□ -0.22
MT-ND1P03886 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC13.66□□□□□ -0.22
MT-ND1P03886 PMS2P2-201ENST00000425039 1128 ntBASIC13.66□□□□□ -0.22
MT-ND1P03886 DFFBP1-201ENST00000433250 979 ntBASIC13.66□□□□□ -0.22
MT-ND1P03886 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.66□□□□□ -0.22
MT-ND1P03886 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.66□□□□□ -0.22
MT-ND1P03886 SPTLC1P1-201ENST00000447199 261 ntBASIC13.66□□□□□ -0.22
MT-ND1P03886 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC13.66□□□□□ -0.22
MT-ND1P03886 FO681548.1-201ENST00000455617 1132 ntBASIC13.66□□□□□ -0.22
MT-ND1P03886 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
MT-ND1P03886 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
MT-ND1P03886 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC13.66□□□□□ -0.22
MT-ND1P03886 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC13.66□□□□□ -0.22
MT-ND1P03886 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.66□□□□□ -0.22
MT-ND1P03886 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.66□□□□□ -0.22
MT-ND1P03886 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC13.66□□□□□ -0.22
MT-ND1P03886 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC13.66□□□□□ -0.22
MT-ND1P03886 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC13.66□□□□□ -0.22
MT-ND1P03886 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC13.66□□□□□ -0.22
MT-ND1P03886 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC13.66□□□□□ -0.22
MT-ND1P03886 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
MT-ND1P03886 INCENP-201ENST00000278849 3698 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
MT-ND1P03886 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
MT-ND1P03886 AL391825.1-201ENST00000457671 1364 ntBASIC13.66□□□□□ -0.22
MT-ND1P03886 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
MT-ND1P03886 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
MT-ND1P03886 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
MT-ND1P03886 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
MT-ND1P03886 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
MT-ND1P03886 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
MT-ND1P03886 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
MT-ND1P03886 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
MT-ND1P03886 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.66□□□□□ -0.22
MT-ND1P03886 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC13.66□□□□□ -0.22
MT-ND1P03886 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
MT-ND1P03886 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.66□□□□□ -0.22
MT-ND1P03886 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC13.66□□□□□ -0.22
MT-ND1P03886 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
MT-ND1P03886 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
MT-ND1P03886 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
MT-ND1P03886 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
MT-ND1P03886 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC13.65□□□□□ -0.22
MT-ND1P03886 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
MT-ND1P03886 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC13.65□□□□□ -0.22
MT-ND1P03886 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
MT-ND1P03886 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
MT-ND1P03886 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
MT-ND1P03886 LRRC59-203ENST00000576448 1531 ntBASIC13.65□□□□□ -0.22
MT-ND1P03886 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
MT-ND1P03886 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
MT-ND1P03886 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC13.65□□□□□ -0.22
MT-ND1P03886 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
MT-ND1P03886 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
MT-ND1P03886 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
MT-ND1P03886 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
MT-ND1P03886 RN7SKP230-201ENST00000365642 335 ntBASIC13.65□□□□□ -0.22
MT-ND1P03886 GGCT-205ENST00000409436 954 ntTSL 3 BASIC13.65□□□□□ -0.22
MT-ND1P03886 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.65□□□□□ -0.22
MT-ND1P03886 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
MT-ND1P03886 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.65□□□□□ -0.22
MT-ND1P03886 AC092183.1-201ENST00000469884 875 ntBASIC13.65□□□□□ -0.22
MT-ND1P03886 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
MT-ND1P03886 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC13.65□□□□□ -0.22
MT-ND1P03886 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
MT-ND1P03886 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
MT-ND1P03886 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC13.65□□□□□ -0.22
MT-ND1P03886 AC092552.1-201ENST00000547243 906 ntBASIC13.65□□□□□ -0.22
MT-ND1P03886 AL359711.2-201ENST00000563105 872 ntBASIC13.65□□□□□ -0.22
MT-ND1P03886 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC13.65□□□□□ -0.22
MT-ND1P03886 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC13.65□□□□□ -0.22
MT-ND1P03886 GPALPP1-207ENST00000611650 899 ntBASIC13.65□□□□□ -0.22
MT-ND1P03886 AC008761.3-201ENST00000624803 892 ntBASIC13.65□□□□□ -0.22
MT-ND1P03886 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC13.65□□□□□ -0.22
MT-ND1P03886 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
MT-ND1P03886 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
MT-ND1P03886 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
MT-ND1P03886 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
MT-ND1P03886 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
MT-ND1P03886 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
MT-ND1P03886 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
MT-ND1P03886 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
MT-ND1P03886 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms