Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
APOA1P02647 AL355102.3-201ENST00000554299 1678 ntBASIC12.9□□□□□ -0.34
APOA1P02647 PDXK-201ENST00000291565 7366 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
APOA1P02647 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
APOA1P02647 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
APOA1P02647 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
APOA1P02647 FAM214B-208ENST00000605244 3016 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
APOA1P02647 PCDHB2-201ENST00000194155 4126 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
APOA1P02647 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
APOA1P02647 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
APOA1P02647 BCL2L2-201ENST00000250405 3605 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
APOA1P02647 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
APOA1P02647 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
APOA1P02647 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC12.9□□□□□ -0.34
APOA1P02647 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC12.9□□□□□ -0.34
APOA1P02647 ZFC3H1-201ENST00000378743 7285 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
APOA1P02647 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC12.9□□□□□ -0.34
APOA1P02647 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
APOA1P02647 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
APOA1P02647 MTMR3-202ENST00000333027 8906 ntTSL 5 BASIC12.9□□□□□ -0.34
APOA1P02647 C10orf90-202ENST00000356858 2995 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
APOA1P02647 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
APOA1P02647 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
APOA1P02647 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
APOA1P02647 AC079781.3-201ENST00000449110 356 ntBASIC12.9□□□□□ -0.34
APOA1P02647 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC12.9□□□□□ -0.34
APOA1P02647 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC12.9□□□□□ -0.34
APOA1P02647 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC12.9□□□□□ -0.34
APOA1P02647 AP001005.1-201ENST00000571755 1248 ntBASIC12.9□□□□□ -0.34
APOA1P02647 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
APOA1P02647 AC025048.3-201ENST00000590609 569 ntBASIC12.9□□□□□ -0.34
APOA1P02647 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
APOA1P02647 AC018529.1-201ENST00000613063 361 ntBASIC12.9□□□□□ -0.34
APOA1P02647 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC12.9□□□□□ -0.34
APOA1P02647 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC12.9□□□□□ -0.34
APOA1P02647 AC005702.4-201ENST00000618393 416 ntBASIC12.9□□□□□ -0.34
APOA1P02647 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC12.9□□□□□ -0.34
APOA1P02647 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC12.9□□□□□ -0.34
APOA1P02647 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
APOA1P02647 TMEM56-201ENST00000370203 6822 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
APOA1P02647 PDE7B-201ENST00000308191 5390 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
APOA1P02647 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
APOA1P02647 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
APOA1P02647 GNAS-214ENST00000371100 4029 ntTSL 5 BASIC12.9□□□□□ -0.34
APOA1P02647 POLR1B-216ENST00000537335 4961 ntTSL 2 BASIC12.9□□□□□ -0.34
APOA1P02647 MAN2C1-242ENST00000569482 3177 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
APOA1P02647 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
APOA1P02647 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
APOA1P02647 F2-205ENST00000530231 1849 ntTSL 5 BASIC12.9□□□□□ -0.34
APOA1P02647 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
APOA1P02647 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.35
APOA1P02647 GRIN1-205ENST00000371555 4003 ntTSL 5 BASIC12.9□□□□□ -0.35
APOA1P02647 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
APOA1P02647 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC12.9□□□□□ -0.35
APOA1P02647 AC008620.2-201ENST00000510294 1569 ntBASIC12.9□□□□□ -0.35
APOA1P02647 RB1-201ENST00000267163 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
APOA1P02647 ATXN2L-201ENST00000325215 3788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
APOA1P02647 PLA2G6-202ENST00000335539 3060 ntTSL 5 BASIC12.9□□□□□ -0.35
APOA1P02647 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
APOA1P02647 GPR161-208ENST00000537209 8256 ntTSL 2 BASIC12.89□□□□□ -0.35
APOA1P02647 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
APOA1P02647 STK3-218ENST00000617590 2485 ntTSL 5 BASIC12.89□□□□□ -0.35
APOA1P02647 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
APOA1P02647 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
APOA1P02647 BTNL8-201ENST00000231229 2229 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
APOA1P02647 COL12A1-202ENST00000345356 5886 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
APOA1P02647 KRT8P14-201ENST00000414254 1442 ntBASIC12.89□□□□□ -0.35
APOA1P02647 PLEKHG3-203ENST00000471182 3106 ntTSL 5 BASIC12.89□□□□□ -0.35
APOA1P02647 CCT3-211ENST00000472765 1858 ntTSL 2 BASIC12.89□□□□□ -0.35
APOA1P02647 SEPT9-201ENST00000329047 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
APOA1P02647 CCDC144A-204ENST00000360524 5830 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
APOA1P02647 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC12.89□□□□□ -0.35
APOA1P02647 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
APOA1P02647 NBPF1-203ENST00000430580 5932 ntAPPRIS P5 TSL 5 BASIC12.89□□□□□ -0.35
APOA1P02647 CYTH1-203ENST00000585509 3315 ntTSL 5 BASIC12.89□□□□□ -0.35
APOA1P02647 MCRIP1-212ENST00000576730 2979 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
APOA1P02647 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
APOA1P02647 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC12.89□□□□□ -0.35
APOA1P02647 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC12.89□□□□□ -0.35
APOA1P02647 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC12.89□□□□□ -0.35
APOA1P02647 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC12.89□□□□□ -0.35
APOA1P02647 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
APOA1P02647 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
APOA1P02647 HLA-K-203ENST00000430151 1046 ntBASIC12.89□□□□□ -0.35
APOA1P02647 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC12.89□□□□□ -0.35
APOA1P02647 GATB-205ENST00000508611 605 ntTSL 2 BASIC12.89□□□□□ -0.35
APOA1P02647 RNA5SP419-201ENST00000515908 135 ntBASIC12.89□□□□□ -0.35
APOA1P02647 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC12.89□□□□□ -0.35
APOA1P02647 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
APOA1P02647 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
APOA1P02647 AC026150.2-201ENST00000564693 1156 ntBASIC12.89□□□□□ -0.35
APOA1P02647 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC12.89□□□□□ -0.35
APOA1P02647 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC12.89□□□□□ -0.35
APOA1P02647 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
APOA1P02647 AC000095.1-201ENST00000603208 874 ntBASIC12.89□□□□□ -0.35
APOA1P02647 RN7SL828P-201ENST00000607615 303 ntBASIC12.89□□□□□ -0.35
APOA1P02647 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC12.89□□□□□ -0.35
APOA1P02647 AF228730.6-201ENST00000641497 218 ntBASIC12.89□□□□□ -0.35
APOA1P02647 AC084121.3-201ENST00000641716 218 ntBASIC12.89□□□□□ -0.35
APOA1P02647 AC092865.6-201ENST00000642101 219 ntBASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms