Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 AC092810.2-201ENST00000431570 362 ntBASIC15.23■□□□□ 0.03
TIMP1P01033 ZNF877P-201ENST00000437614 612 ntBASIC15.23■□□□□ 0.03
TIMP1P01033 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TIMP1P01033 C10orf91-203ENST00000490765 462 ntTSL 3 BASIC15.23■□□□□ 0.03
TIMP1P01033 GPX3-202ENST00000517973 612 ntTSL 3 BASIC15.23■□□□□ 0.03
TIMP1P01033 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC15.23■□□□□ 0.03
TIMP1P01033 CDIPT-AS1-202ENST00000565014 729 ntTSL 2 BASIC15.23■□□□□ 0.03
TIMP1P01033 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC15.23■□□□□ 0.03
TIMP1P01033 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TIMP1P01033 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TIMP1P01033 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TIMP1P01033 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TIMP1P01033 AC091951.1-201ENST00000512854 2465 ntBASIC15.23■□□□□ 0.03
TIMP1P01033 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TIMP1P01033 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.23■□□□□ 0.03
TIMP1P01033 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TIMP1P01033 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.23■□□□□ 0.03
TIMP1P01033 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TIMP1P01033 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TIMP1P01033 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TIMP1P01033 LILRP2-202ENST00000413572 1383 ntBASIC15.23■□□□□ 0.03
TIMP1P01033 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TIMP1P01033 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC15.22■□□□□ 0.03
TIMP1P01033 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC15.22■□□□□ 0.03
TIMP1P01033 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TIMP1P01033 AL590824.1-201ENST00000403828 1349 ntBASIC15.22■□□□□ 0.03
TIMP1P01033 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
TIMP1P01033 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TIMP1P01033 AL109954.1-202ENST00000564051 2148 ntBASIC15.22■□□□□ 0.03
TIMP1P01033 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.22■□□□□ 0.03
TIMP1P01033 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
TIMP1P01033 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.22■□□□□ 0.03
TIMP1P01033 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TIMP1P01033 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
TIMP1P01033 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
TIMP1P01033 C18orf21-202ENST00000333234 958 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TIMP1P01033 AIG1-203ENST00000367596 559 ntTSL 2 BASIC15.22■□□□□ 0.03
TIMP1P01033 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC15.22■□□□□ 0.03
TIMP1P01033 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TIMP1P01033 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC15.22■□□□□ 0.03
TIMP1P01033 HMGA1P1-201ENST00000415560 1062 ntBASIC15.22■□□□□ 0.03
TIMP1P01033 MAGEA7P-201ENST00000436482 942 ntBASIC15.22■□□□□ 0.03
TIMP1P01033 AL136084.1-201ENST00000449172 318 ntBASIC15.22■□□□□ 0.03
TIMP1P01033 HNRNPA3P6-201ENST00000472163 1006 ntBASIC15.22■□□□□ 0.03
TIMP1P01033 C11orf1-202ENST00000528125 534 ntTSL 2 BASIC15.22■□□□□ 0.03
TIMP1P01033 ACY3-202ENST00000529256 933 ntTSL 3 BASIC15.22■□□□□ 0.03
TIMP1P01033 AC093510.1-202ENST00000546238 442 ntTSL 3 BASIC15.22■□□□□ 0.03
TIMP1P01033 AC016582.2-202ENST00000587765 1094 ntBASIC15.22■□□□□ 0.03
TIMP1P01033 ZNF175-204ENST00000596504 580 ntTSL 2 BASIC15.22■□□□□ 0.03
TIMP1P01033 MIR8071-1-201ENST00000616769 65 ntBASIC15.22■□□□□ 0.03
TIMP1P01033 MIR8071-2-201ENST00000616772 65 ntBASIC15.22■□□□□ 0.03
TIMP1P01033 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC15.22■□□□□ 0.03
TIMP1P01033 GSTT2-202ENST00000621118 1112 ntTSL 5 BASIC15.22■□□□□ 0.03
TIMP1P01033 AC245100.4-201ENST00000634549 1082 ntTSL 5 BASIC15.22■□□□□ 0.03
TIMP1P01033 ADH1B-207ENST00000639454 1210 ntTSL 5 BASIC15.22■□□□□ 0.03
TIMP1P01033 APOBEC3A-201ENST00000249116 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TIMP1P01033 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TIMP1P01033 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
TIMP1P01033 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.22■□□□□ 0.03
TIMP1P01033 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.22■□□□□ 0.03
TIMP1P01033 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TIMP1P01033 RPAIN-202ENST00000381208 1394 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TIMP1P01033 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TIMP1P01033 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TIMP1P01033 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TIMP1P01033 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.21■□□□□ 0.03
TIMP1P01033 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TIMP1P01033 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.21■□□□□ 0.03
TIMP1P01033 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
TIMP1P01033 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TIMP1P01033 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TIMP1P01033 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TIMP1P01033 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TIMP1P01033 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.21■□□□□ 0.03
TIMP1P01033 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TIMP1P01033 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
TIMP1P01033 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TIMP1P01033 SNCAIP-206ENST00000414317 1591 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TIMP1P01033 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
TIMP1P01033 PTGR1-205ENST00000407693 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TIMP1P01033 AC015909.5-201ENST00000624336 2266 ntBASIC15.21■□□□□ 0.03
TIMP1P01033 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
TIMP1P01033 AL359649.1-202ENST00000375713 443 ntTSL 5 BASIC15.21■□□□□ 0.03
TIMP1P01033 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC15.21■□□□□ 0.03
TIMP1P01033 RHOQP2-201ENST00000449922 579 ntBASIC15.21■□□□□ 0.03
TIMP1P01033 ALG1L15P-201ENST00000482834 794 ntBASIC15.21■□□□□ 0.03
TIMP1P01033 CD81-209ENST00000492627 886 ntTSL 3 BASIC15.21■□□□□ 0.03
TIMP1P01033 SMIM15-202ENST00000507416 584 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
TIMP1P01033 KHDRBS3-206ENST00000520981 1243 ntTSL 5 BASIC15.21■□□□□ 0.03
TIMP1P01033 CTBP2P6-201ENST00000526402 1229 ntBASIC15.21■□□□□ 0.03
TIMP1P01033 BLOC1S5-205ENST00000543936 368 ntTSL 2 BASIC15.21■□□□□ 0.03
TIMP1P01033 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC15.21■□□□□ 0.03
TIMP1P01033 MYMX-201ENST00000573382 817 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
TIMP1P01033 KRT8P34-201ENST00000577607 1044 ntBASIC15.21■□□□□ 0.03
TIMP1P01033 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC15.21■□□□□ 0.03
TIMP1P01033 PAX6-237ENST00000638696 1203 ntTSL 5 BASIC15.21■□□□□ 0.03
TIMP1P01033 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
TIMP1P01033 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
TIMP1P01033 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TIMP1P01033 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms