Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 PLEKHG6-202ENST00000304581 1424 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RAPGEF3O95398 PCP2-201ENST00000311069 776 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
RAPGEF3O95398 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
RAPGEF3O95398 SULT1A3-201ENST00000338971 1097 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
RAPGEF3O95398 OR2T27-201ENST00000344889 954 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
RAPGEF3O95398 INCA1-201ENST00000355025 1383 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
RAPGEF3O95398 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RAPGEF3O95398 CHEK2-203ENST00000382565 696 ntTSL 5 BASIC20.91■□□□□ 0.94
RAPGEF3O95398 CORO1C-203ENST00000421578 1296 ntTSL 2 BASIC20.91■□□□□ 0.94
RAPGEF3O95398 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC20.91■□□□□ 0.94
RAPGEF3O95398 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC20.91■□□□□ 0.94
RAPGEF3O95398 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
RAPGEF3O95398 AC079250.1-201ENST00000456046 531 ntBASIC20.91■□□□□ 0.94
RAPGEF3O95398 XRN1-203ENST00000463916 2075 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RAPGEF3O95398 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RAPGEF3O95398 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC20.91■□□□□ 0.94
RAPGEF3O95398 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RAPGEF3O95398 MSRB1-205ENST00000564908 550 ntTSL 3 BASIC20.91■□□□□ 0.94
RAPGEF3O95398 AC005736.3-201ENST00000571169 244 ntTSL 5 BASIC20.91■□□□□ 0.94
RAPGEF3O95398 DERL2-206ENST00000572834 589 ntTSL 3 BASIC20.91■□□□□ 0.94
RAPGEF3O95398 BOLA3P2-201ENST00000586496 323 ntBASIC20.91■□□□□ 0.94
RAPGEF3O95398 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC20.91■□□□□ 0.94
RAPGEF3O95398 MBIP-211ENST00000621657 1809 ntTSL 5 BASIC20.91■□□□□ 0.94
RAPGEF3O95398 GARS-210ENST00000627489 324 ntTSL 4 BASIC20.91■□□□□ 0.94
RAPGEF3O95398 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC20.9■□□□□ 0.94
RAPGEF3O95398 AL118508.1-201ENST00000613502 2345 ntBASIC20.9■□□□□ 0.94
RAPGEF3O95398 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC20.9■□□□□ 0.94
RAPGEF3O95398 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAPGEF3O95398 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC20.9■□□□□ 0.94
RAPGEF3O95398 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC20.9■□□□□ 0.94
RAPGEF3O95398 AC068760.1-201ENST00000493579 1953 ntBASIC20.9■□□□□ 0.94
RAPGEF3O95398 CA2-201ENST00000285379 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAPGEF3O95398 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC20.9■□□□□ 0.94
RAPGEF3O95398 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
RAPGEF3O95398 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC20.9■□□□□ 0.94
RAPGEF3O95398 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
RAPGEF3O95398 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
RAPGEF3O95398 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAPGEF3O95398 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAPGEF3O95398 BLVRA-201ENST00000265523 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAPGEF3O95398 NANOS3-201ENST00000339133 581 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RAPGEF3O95398 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RAPGEF3O95398 SLC35A2-203ENST00000376515 1044 ntTSL 3 BASIC20.9■□□□□ 0.94
RAPGEF3O95398 CRYZL1-205ENST00000399442 612 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RAPGEF3O95398 AC041040.1-201ENST00000425197 460 ntBASIC20.9■□□□□ 0.94
RAPGEF3O95398 CA5BP1-205ENST00000435806 1064 ntBASIC20.9■□□□□ 0.94
RAPGEF3O95398 SMAD1-AS1-201ENST00000513542 481 ntTSL 2 BASIC20.9■□□□□ 0.94
RAPGEF3O95398 LINC00643-202ENST00000553426 526 ntTSL 3 BASIC20.9■□□□□ 0.94
RAPGEF3O95398 AC148476.1-201ENST00000622182 705 ntBASIC20.9■□□□□ 0.94
RAPGEF3O95398 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAPGEF3O95398 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAPGEF3O95398 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAPGEF3O95398 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC20.9■□□□□ 0.94
RAPGEF3O95398 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAPGEF3O95398 RNF121-211ENST00000530137 2202 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RAPGEF3O95398 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RAPGEF3O95398 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAPGEF3O95398 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAPGEF3O95398 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAPGEF3O95398 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAPGEF3O95398 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC20.89■□□□□ 0.94
RAPGEF3O95398 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
RAPGEF3O95398 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC20.89■□□□□ 0.93
RAPGEF3O95398 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RAPGEF3O95398 AC011498.7-201ENST00000624986 2027 ntBASIC20.89■□□□□ 0.93
RAPGEF3O95398 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
RAPGEF3O95398 RNF181-201ENST00000306368 569 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
RAPGEF3O95398 DPPA5-201ENST00000370370 679 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RAPGEF3O95398 ACOT6-201ENST00000381139 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RAPGEF3O95398 THAP4-203ENST00000402545 833 ntTSL 5 BASIC20.89■□□□□ 0.93
RAPGEF3O95398 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC20.89■□□□□ 0.93
RAPGEF3O95398 HNF1A-AS1-201ENST00000433033 612 ntTSL 3 BASIC20.89■□□□□ 0.93
RAPGEF3O95398 RN7SL794P-201ENST00000469816 280 ntBASIC20.89■□□□□ 0.93
RAPGEF3O95398 AF186996.6-201ENST00000485294 149 ntBASIC20.89■□□□□ 0.93
RAPGEF3O95398 IGHVII-74-1-201ENST00000517572 241 ntBASIC20.89■□□□□ 0.93
RAPGEF3O95398 AC007223.1-201ENST00000564076 572 ntTSL 3 BASIC20.89■□□□□ 0.93
RAPGEF3O95398 ECSIT-211ENST00000592312 1286 ntTSL 5 BASIC20.89■□□□□ 0.93
RAPGEF3O95398 AC134878.2-201ENST00000620700 1265 ntBASIC20.89■□□□□ 0.93
RAPGEF3O95398 LINC00969-253ENST00000625338 804 ntTSL 5 BASIC20.89■□□□□ 0.93
RAPGEF3O95398 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
RAPGEF3O95398 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RAPGEF3O95398 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RAPGEF3O95398 GPI-205ENST00000586425 1799 ntTSL 5 BASIC20.89■□□□□ 0.93
RAPGEF3O95398 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RAPGEF3O95398 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RAPGEF3O95398 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RAPGEF3O95398 GTF2A1L-201ENST00000403751 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RAPGEF3O95398 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RAPGEF3O95398 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RAPGEF3O95398 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RAPGEF3O95398 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RAPGEF3O95398 CTSD-208ENST00000636843 1512 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
RAPGEF3O95398 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAPGEF3O95398 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.88■□□□□ 0.93
RAPGEF3O95398 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAPGEF3O95398 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
RAPGEF3O95398 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC20.88■□□□□ 0.93
RAPGEF3O95398 MYC-206ENST00000613283 1365 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAPGEF3O95398 ELP4-223ENST00000640342 1392 ntTSL 5 BASIC20.88■□□□□ 0.93
RAPGEF3O95398 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms