Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAI2Q9Y5P3 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.6□□□□□ -0.07
RAI2Q9Y5P3 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC14.6□□□□□ -0.07
RAI2Q9Y5P3 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RAI2Q9Y5P3 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAI2Q9Y5P3 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAI2Q9Y5P3 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAI2Q9Y5P3 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
RAI2Q9Y5P3 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAI2Q9Y5P3 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RAI2Q9Y5P3 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
RAI2Q9Y5P3 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAI2Q9Y5P3 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
RAI2Q9Y5P3 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC14.59□□□□□ -0.07
RAI2Q9Y5P3 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
RAI2Q9Y5P3 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RAI2Q9Y5P3 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
RAI2Q9Y5P3 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAI2Q9Y5P3 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAI2Q9Y5P3 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAI2Q9Y5P3 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAI2Q9Y5P3 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC14.59□□□□□ -0.07
RAI2Q9Y5P3 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RAI2Q9Y5P3 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC14.59□□□□□ -0.07
RAI2Q9Y5P3 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC14.59□□□□□ -0.07
RAI2Q9Y5P3 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC14.59□□□□□ -0.07
RAI2Q9Y5P3 AC022217.1-201ENST00000521069 738 ntBASIC14.59□□□□□ -0.07
RAI2Q9Y5P3 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC14.59□□□□□ -0.07
RAI2Q9Y5P3 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC14.59□□□□□ -0.07
RAI2Q9Y5P3 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC14.59□□□□□ -0.07
RAI2Q9Y5P3 AC138649.2-201ENST00000615886 705 ntBASIC14.59□□□□□ -0.07
RAI2Q9Y5P3 AP003419.4-201ENST00000616071 517 ntBASIC14.59□□□□□ -0.07
RAI2Q9Y5P3 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RAI2Q9Y5P3 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RAI2Q9Y5P3 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC14.59□□□□□ -0.07
RAI2Q9Y5P3 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
RAI2Q9Y5P3 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.59□□□□□ -0.07
RAI2Q9Y5P3 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
RAI2Q9Y5P3 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAI2Q9Y5P3 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC14.59□□□□□ -0.07
RAI2Q9Y5P3 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAI2Q9Y5P3 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RAI2Q9Y5P3 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.59□□□□□ -0.07
RAI2Q9Y5P3 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAI2Q9Y5P3 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAI2Q9Y5P3 SBF1P1-201ENST00000444527 5631 ntBASIC14.59□□□□□ -0.07
RAI2Q9Y5P3 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC14.59□□□□□ -0.07
RAI2Q9Y5P3 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
RAI2Q9Y5P3 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RAI2Q9Y5P3 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAI2Q9Y5P3 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RAI2Q9Y5P3 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RAI2Q9Y5P3 CICP16-201ENST00000502609 2813 ntBASIC14.59□□□□□ -0.07
RAI2Q9Y5P3 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAI2Q9Y5P3 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC14.59□□□□□ -0.07
RAI2Q9Y5P3 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
RAI2Q9Y5P3 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
RAI2Q9Y5P3 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
RAI2Q9Y5P3 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
RAI2Q9Y5P3 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
RAI2Q9Y5P3 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
RAI2Q9Y5P3 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
RAI2Q9Y5P3 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.58□□□□□ -0.07
RAI2Q9Y5P3 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
RAI2Q9Y5P3 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC14.58□□□□□ -0.07
RAI2Q9Y5P3 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
RAI2Q9Y5P3 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
RAI2Q9Y5P3 AC016397.2-201ENST00000624848 1985 ntBASIC14.58□□□□□ -0.07
RAI2Q9Y5P3 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAI2Q9Y5P3 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
RAI2Q9Y5P3 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RAI2Q9Y5P3 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
RAI2Q9Y5P3 AL022313.4-201ENST00000562756 2046 ntBASIC14.58□□□□□ -0.08
RAI2Q9Y5P3 FUK-202ENST00000378912 3925 ntTSL 2 BASIC14.58□□□□□ -0.08
RAI2Q9Y5P3 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAI2Q9Y5P3 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.58□□□□□ -0.08
RAI2Q9Y5P3 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC14.58□□□□□ -0.08
RAI2Q9Y5P3 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAI2Q9Y5P3 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAI2Q9Y5P3 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC14.58□□□□□ -0.08
RAI2Q9Y5P3 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAI2Q9Y5P3 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAI2Q9Y5P3 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RAI2Q9Y5P3 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAI2Q9Y5P3 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAI2Q9Y5P3 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RAI2Q9Y5P3 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.58□□□□□ -0.08
RAI2Q9Y5P3 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC14.58□□□□□ -0.08
RAI2Q9Y5P3 EEF1DP6-201ENST00000449232 372 ntBASIC14.58□□□□□ -0.08
RAI2Q9Y5P3 OARD1-204ENST00000464633 717 ntTSL 2 BASIC14.58□□□□□ -0.08
RAI2Q9Y5P3 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RAI2Q9Y5P3 AC125604.1-201ENST00000496255 707 ntBASIC14.58□□□□□ -0.08
RAI2Q9Y5P3 RCC2P8-201ENST00000502779 1035 ntBASIC14.58□□□□□ -0.08
RAI2Q9Y5P3 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RAI2Q9Y5P3 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAI2Q9Y5P3 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAI2Q9Y5P3 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC14.58□□□□□ -0.08
RAI2Q9Y5P3 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC14.58□□□□□ -0.08
RAI2Q9Y5P3 AL591471.1-201ENST00000621855 229 ntBASIC14.58□□□□□ -0.08
RAI2Q9Y5P3 AC090386.2-201ENST00000623010 1039 ntBASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms