Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCDHGC4Q9Y5F7 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCDHGC4Q9Y5F7 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCDHGC4Q9Y5F7 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCDHGC4Q9Y5F7 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCDHGC4Q9Y5F7 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
PCDHGC4Q9Y5F7 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.54□□□□□ -0.08
PCDHGC4Q9Y5F7 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCDHGC4Q9Y5F7 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCDHGC4Q9Y5F7 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC14.54□□□□□ -0.08
PCDHGC4Q9Y5F7 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC14.54□□□□□ -0.08
PCDHGC4Q9Y5F7 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
PCDHGC4Q9Y5F7 CYP46A4P-201ENST00000414953 267 ntBASIC14.54□□□□□ -0.08
PCDHGC4Q9Y5F7 ACTG1P2-201ENST00000415776 1125 ntBASIC14.54□□□□□ -0.08
PCDHGC4Q9Y5F7 ACTG1P11-201ENST00000425411 1125 ntBASIC14.54□□□□□ -0.08
PCDHGC4Q9Y5F7 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PCDHGC4Q9Y5F7 CALR4P-201ENST00000431943 946 ntBASIC14.54□□□□□ -0.08
PCDHGC4Q9Y5F7 AC005077.2-201ENST00000449786 690 ntBASIC14.54□□□□□ -0.08
PCDHGC4Q9Y5F7 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCDHGC4Q9Y5F7 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC14.54□□□□□ -0.08
PCDHGC4Q9Y5F7 NOP2-211ENST00000540228 668 ntTSL 2 BASIC14.54□□□□□ -0.08
PCDHGC4Q9Y5F7 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
PCDHGC4Q9Y5F7 AC140658.4-201ENST00000561990 352 ntBASIC14.54□□□□□ -0.08
PCDHGC4Q9Y5F7 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC14.54□□□□□ -0.08
PCDHGC4Q9Y5F7 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC14.54□□□□□ -0.08
PCDHGC4Q9Y5F7 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
PCDHGC4Q9Y5F7 AC091544.8-201ENST00000619490 361 ntBASIC14.54□□□□□ -0.08
PCDHGC4Q9Y5F7 AC100757.4-201ENST00000626934 759 ntBASIC14.54□□□□□ -0.08
PCDHGC4Q9Y5F7 NAP1L6-202ENST00000641404 1222 ntBASIC14.54□□□□□ -0.08
PCDHGC4Q9Y5F7 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCDHGC4Q9Y5F7 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PCDHGC4Q9Y5F7 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PCDHGC4Q9Y5F7 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCDHGC4Q9Y5F7 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC14.54□□□□□ -0.08
PCDHGC4Q9Y5F7 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC14.54□□□□□ -0.08
PCDHGC4Q9Y5F7 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCDHGC4Q9Y5F7 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PCDHGC4Q9Y5F7 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCDHGC4Q9Y5F7 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.54□□□□□ -0.08
PCDHGC4Q9Y5F7 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
PCDHGC4Q9Y5F7 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCDHGC4Q9Y5F7 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
PCDHGC4Q9Y5F7 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
PCDHGC4Q9Y5F7 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
PCDHGC4Q9Y5F7 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.54□□□□□ -0.08
PCDHGC4Q9Y5F7 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
PCDHGC4Q9Y5F7 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCDHGC4Q9Y5F7 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCDHGC4Q9Y5F7 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHGC4Q9Y5F7 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHGC4Q9Y5F7 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHGC4Q9Y5F7 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
PCDHGC4Q9Y5F7 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHGC4Q9Y5F7 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
PCDHGC4Q9Y5F7 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHGC4Q9Y5F7 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHGC4Q9Y5F7 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
PCDHGC4Q9Y5F7 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHGC4Q9Y5F7 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHGC4Q9Y5F7 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC14.53□□□□□ -0.08
PCDHGC4Q9Y5F7 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC14.53□□□□□ -0.08
PCDHGC4Q9Y5F7 CCT8L1P-201ENST00000465400 1674 ntBASIC14.53□□□□□ -0.08
PCDHGC4Q9Y5F7 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHGC4Q9Y5F7 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHGC4Q9Y5F7 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHGC4Q9Y5F7 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
PCDHGC4Q9Y5F7 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHGC4Q9Y5F7 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHGC4Q9Y5F7 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
PCDHGC4Q9Y5F7 CMC1-204ENST00000423894 549 ntTSL 2 BASIC14.53□□□□□ -0.08
PCDHGC4Q9Y5F7 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHGC4Q9Y5F7 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC14.53□□□□□ -0.08
PCDHGC4Q9Y5F7 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC14.53□□□□□ -0.08
PCDHGC4Q9Y5F7 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
PCDHGC4Q9Y5F7 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC14.53□□□□□ -0.08
PCDHGC4Q9Y5F7 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC14.53□□□□□ -0.08
PCDHGC4Q9Y5F7 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHGC4Q9Y5F7 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHGC4Q9Y5F7 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.53□□□□□ -0.08
PCDHGC4Q9Y5F7 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHGC4Q9Y5F7 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC14.53□□□□□ -0.08
PCDHGC4Q9Y5F7 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.53□□□□□ -0.08
PCDHGC4Q9Y5F7 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHGC4Q9Y5F7 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHGC4Q9Y5F7 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHGC4Q9Y5F7 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
PCDHGC4Q9Y5F7 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.53□□□□□ -0.08
PCDHGC4Q9Y5F7 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC14.53□□□□□ -0.08
PCDHGC4Q9Y5F7 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
PCDHGC4Q9Y5F7 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC14.53□□□□□ -0.08
PCDHGC4Q9Y5F7 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHGC4Q9Y5F7 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PCDHGC4Q9Y5F7 SBF1P1-201ENST00000444527 5631 ntBASIC14.52□□□□□ -0.08
PCDHGC4Q9Y5F7 STK26-204ENST00000481105 1835 ntTSL 2 BASIC14.52□□□□□ -0.08
PCDHGC4Q9Y5F7 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PCDHGC4Q9Y5F7 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PCDHGC4Q9Y5F7 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC14.52□□□□□ -0.08
PCDHGC4Q9Y5F7 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC14.52□□□□□ -0.08
PCDHGC4Q9Y5F7 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
PCDHGC4Q9Y5F7 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms