Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VPS9D1Q9Y2B5 RPL5-202ENST00000370321 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VPS9D1Q9Y2B5 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC14.5□□□□□ -0.09
VPS9D1Q9Y2B5 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VPS9D1Q9Y2B5 MXI1-205ENST00000393134 889 ntTSL 2 BASIC14.5□□□□□ -0.09
VPS9D1Q9Y2B5 AC079178.1-201ENST00000420915 656 ntBASIC14.5□□□□□ -0.09
VPS9D1Q9Y2B5 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC14.5□□□□□ -0.09
VPS9D1Q9Y2B5 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC14.5□□□□□ -0.09
VPS9D1Q9Y2B5 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC14.5□□□□□ -0.09
VPS9D1Q9Y2B5 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC14.5□□□□□ -0.09
VPS9D1Q9Y2B5 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC14.5□□□□□ -0.09
VPS9D1Q9Y2B5 CTBP2P5-201ENST00000454986 1264 ntBASIC14.5□□□□□ -0.09
VPS9D1Q9Y2B5 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC14.5□□□□□ -0.09
VPS9D1Q9Y2B5 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC14.5□□□□□ -0.09
VPS9D1Q9Y2B5 AC010834.3-201ENST00000520562 939 ntTSL 3 BASIC14.5□□□□□ -0.09
VPS9D1Q9Y2B5 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC14.5□□□□□ -0.09
VPS9D1Q9Y2B5 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC14.5□□□□□ -0.09
VPS9D1Q9Y2B5 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC14.5□□□□□ -0.09
VPS9D1Q9Y2B5 ZNF826P-202ENST00000542380 1067 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
VPS9D1Q9Y2B5 NUDT4-205ENST00000548662 765 ntTSL 3 BASIC14.5□□□□□ -0.09
VPS9D1Q9Y2B5 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC14.5□□□□□ -0.09
VPS9D1Q9Y2B5 AC132192.2-201ENST00000596206 1147 ntBASIC14.5□□□□□ -0.09
VPS9D1Q9Y2B5 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC14.5□□□□□ -0.09
VPS9D1Q9Y2B5 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC14.5□□□□□ -0.09
VPS9D1Q9Y2B5 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
VPS9D1Q9Y2B5 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
VPS9D1Q9Y2B5 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VPS9D1Q9Y2B5 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14.5□□□□□ -0.09
VPS9D1Q9Y2B5 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
VPS9D1Q9Y2B5 ADAMTS7P1-201ENST00000613213 4793 ntBASIC14.5□□□□□ -0.09
VPS9D1Q9Y2B5 KRT8P24-201ENST00000560290 1559 ntBASIC14.5□□□□□ -0.09
VPS9D1Q9Y2B5 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
VPS9D1Q9Y2B5 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.5□□□□□ -0.09
VPS9D1Q9Y2B5 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VPS9D1Q9Y2B5 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
VPS9D1Q9Y2B5 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.5□□□□□ -0.09
VPS9D1Q9Y2B5 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
VPS9D1Q9Y2B5 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
VPS9D1Q9Y2B5 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VPS9D1Q9Y2B5 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
VPS9D1Q9Y2B5 AL928921.2-201ENST00000641325 2442 ntBASIC14.5□□□□□ -0.09
VPS9D1Q9Y2B5 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
VPS9D1Q9Y2B5 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VPS9D1Q9Y2B5 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VPS9D1Q9Y2B5 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VPS9D1Q9Y2B5 AC117489.1-201ENST00000625169 3217 ntBASIC14.49□□□□□ -0.09
VPS9D1Q9Y2B5 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
VPS9D1Q9Y2B5 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VPS9D1Q9Y2B5 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
VPS9D1Q9Y2B5 MST1P2-201ENST00000457982 2291 ntBASIC14.49□□□□□ -0.09
VPS9D1Q9Y2B5 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.49□□□□□ -0.09
VPS9D1Q9Y2B5 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
VPS9D1Q9Y2B5 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VPS9D1Q9Y2B5 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VPS9D1Q9Y2B5 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.49□□□□□ -0.09
VPS9D1Q9Y2B5 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
VPS9D1Q9Y2B5 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VPS9D1Q9Y2B5 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VPS9D1Q9Y2B5 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VPS9D1Q9Y2B5 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
VPS9D1Q9Y2B5 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
VPS9D1Q9Y2B5 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
VPS9D1Q9Y2B5 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VPS9D1Q9Y2B5 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VPS9D1Q9Y2B5 HIST2H2BB-201ENST00000449108 381 ntBASIC14.49□□□□□ -0.09
VPS9D1Q9Y2B5 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC14.49□□□□□ -0.09
VPS9D1Q9Y2B5 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
VPS9D1Q9Y2B5 RBM7-207ENST00000544582 692 ntTSL 3 BASIC14.49□□□□□ -0.09
VPS9D1Q9Y2B5 AC105430.1-202ENST00000567477 483 ntTSL 3 BASIC14.49□□□□□ -0.09
VPS9D1Q9Y2B5 AC126365.2-201ENST00000580630 379 ntBASIC14.49□□□□□ -0.09
VPS9D1Q9Y2B5 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC14.49□□□□□ -0.09
VPS9D1Q9Y2B5 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
VPS9D1Q9Y2B5 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC14.49□□□□□ -0.09
VPS9D1Q9Y2B5 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC14.49□□□□□ -0.09
VPS9D1Q9Y2B5 AL138960.2-201ENST00000625145 535 ntBASIC14.49□□□□□ -0.09
VPS9D1Q9Y2B5 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
VPS9D1Q9Y2B5 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
VPS9D1Q9Y2B5 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VPS9D1Q9Y2B5 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
VPS9D1Q9Y2B5 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VPS9D1Q9Y2B5 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
VPS9D1Q9Y2B5 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC14.49□□□□□ -0.09
VPS9D1Q9Y2B5 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC14.49□□□□□ -0.09
VPS9D1Q9Y2B5 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VPS9D1Q9Y2B5 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
VPS9D1Q9Y2B5 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
VPS9D1Q9Y2B5 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
VPS9D1Q9Y2B5 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
VPS9D1Q9Y2B5 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC14.49□□□□□ -0.09
VPS9D1Q9Y2B5 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VPS9D1Q9Y2B5 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
VPS9D1Q9Y2B5 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.49□□□□□ -0.09
VPS9D1Q9Y2B5 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VPS9D1Q9Y2B5 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VPS9D1Q9Y2B5 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
VPS9D1Q9Y2B5 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.49□□□□□ -0.09
VPS9D1Q9Y2B5 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
VPS9D1Q9Y2B5 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
VPS9D1Q9Y2B5 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
VPS9D1Q9Y2B5 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms