Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
KIAA1549Q9HCM3 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
KIAA1549Q9HCM3 AK2P2-201ENST00000439142 405 ntBASIC12.69□□□□□ -0.38
KIAA1549Q9HCM3 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC12.69□□□□□ -0.38
KIAA1549Q9HCM3 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC12.69□□□□□ -0.38
KIAA1549Q9HCM3 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC12.69□□□□□ -0.38
KIAA1549Q9HCM3 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC12.69□□□□□ -0.38
KIAA1549Q9HCM3 MBP-227ENST00000526111 581 ntTSL 4 BASIC12.69□□□□□ -0.38
KIAA1549Q9HCM3 AP002803.1-201ENST00000528836 498 ntBASIC12.69□□□□□ -0.38
KIAA1549Q9HCM3 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
KIAA1549Q9HCM3 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC12.69□□□□□ -0.38
KIAA1549Q9HCM3 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC12.69□□□□□ -0.38
KIAA1549Q9HCM3 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
KIAA1549Q9HCM3 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
KIAA1549Q9HCM3 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
KIAA1549Q9HCM3 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC12.69□□□□□ -0.38
KIAA1549Q9HCM3 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
KIAA1549Q9HCM3 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
KIAA1549Q9HCM3 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC12.69□□□□□ -0.38
KIAA1549Q9HCM3 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
KIAA1549Q9HCM3 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
KIAA1549Q9HCM3 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
KIAA1549Q9HCM3 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
KIAA1549Q9HCM3 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC12.69□□□□□ -0.38
KIAA1549Q9HCM3 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC12.69□□□□□ -0.38
KIAA1549Q9HCM3 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC12.69□□□□□ -0.38
KIAA1549Q9HCM3 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
KIAA1549Q9HCM3 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
KIAA1549Q9HCM3 AL928921.2-201ENST00000641325 2442 ntBASIC12.69□□□□□ -0.38
KIAA1549Q9HCM3 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
KIAA1549Q9HCM3 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
KIAA1549Q9HCM3 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
KIAA1549Q9HCM3 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
KIAA1549Q9HCM3 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
KIAA1549Q9HCM3 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
KIAA1549Q9HCM3 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
KIAA1549Q9HCM3 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC12.69□□□□□ -0.38
KIAA1549Q9HCM3 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
KIAA1549Q9HCM3 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC12.69□□□□□ -0.38
KIAA1549Q9HCM3 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC12.69□□□□□ -0.38
KIAA1549Q9HCM3 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC12.69□□□□□ -0.38
KIAA1549Q9HCM3 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
KIAA1549Q9HCM3 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
KIAA1549Q9HCM3 AL627389.1-201ENST00000413508 1182 ntBASIC12.69□□□□□ -0.38
KIAA1549Q9HCM3 CR383656.3-201ENST00000551315 183 ntBASIC12.69□□□□□ -0.38
KIAA1549Q9HCM3 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
KIAA1549Q9HCM3 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC12.69□□□□□ -0.38
KIAA1549Q9HCM3 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
KIAA1549Q9HCM3 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC12.68□□□□□ -0.38
KIAA1549Q9HCM3 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
KIAA1549Q9HCM3 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
KIAA1549Q9HCM3 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
KIAA1549Q9HCM3 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC12.68□□□□□ -0.38
KIAA1549Q9HCM3 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
KIAA1549Q9HCM3 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC12.68□□□□□ -0.38
KIAA1549Q9HCM3 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
KIAA1549Q9HCM3 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
KIAA1549Q9HCM3 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
KIAA1549Q9HCM3 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
KIAA1549Q9HCM3 AC111170.3-201ENST00000624282 2464 ntBASIC12.68□□□□□ -0.38
KIAA1549Q9HCM3 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
KIAA1549Q9HCM3 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
KIAA1549Q9HCM3 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
KIAA1549Q9HCM3 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
KIAA1549Q9HCM3 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
KIAA1549Q9HCM3 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
KIAA1549Q9HCM3 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
KIAA1549Q9HCM3 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
KIAA1549Q9HCM3 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
KIAA1549Q9HCM3 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
KIAA1549Q9HCM3 HIST2H2BA-201ENST00000412169 381 ntBASIC12.68□□□□□ -0.38
KIAA1549Q9HCM3 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC12.68□□□□□ -0.38
KIAA1549Q9HCM3 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC12.68□□□□□ -0.38
KIAA1549Q9HCM3 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC12.68□□□□□ -0.38
KIAA1549Q9HCM3 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC12.68□□□□□ -0.38
KIAA1549Q9HCM3 AL132994.1-201ENST00000554098 400 ntBASIC12.68□□□□□ -0.38
KIAA1549Q9HCM3 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
KIAA1549Q9HCM3 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
KIAA1549Q9HCM3 AC117503.4-201ENST00000623229 1418 ntBASIC12.68□□□□□ -0.38
KIAA1549Q9HCM3 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
KIAA1549Q9HCM3 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
KIAA1549Q9HCM3 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
KIAA1549Q9HCM3 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC12.68□□□□□ -0.38
KIAA1549Q9HCM3 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
KIAA1549Q9HCM3 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
KIAA1549Q9HCM3 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC12.68□□□□□ -0.38
KIAA1549Q9HCM3 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
KIAA1549Q9HCM3 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
KIAA1549Q9HCM3 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
KIAA1549Q9HCM3 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
KIAA1549Q9HCM3 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
KIAA1549Q9HCM3 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
KIAA1549Q9HCM3 AC104581.4-201ENST00000623126 3052 ntBASIC12.67□□□□□ -0.38
KIAA1549Q9HCM3 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
KIAA1549Q9HCM3 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC12.67□□□□□ -0.38
KIAA1549Q9HCM3 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC12.67□□□□□ -0.38
KIAA1549Q9HCM3 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC12.67□□□□□ -0.38
KIAA1549Q9HCM3 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
KIAA1549Q9HCM3 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC12.67□□□□□ -0.38
KIAA1549Q9HCM3 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms