Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 IL4-201ENST00000231449 616 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 JTB-202ENST00000356648 1040 ntTSL 2 BASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 PTPA-215ENST00000432124 567 ntTSL 4 BASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 AC098483.1-201ENST00000438623 955 ntTSL 5 BASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 AC006335.1-201ENST00000445200 547 ntBASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 RPSAP15-201ENST00000448168 861 ntBASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 AL035414.1-201ENST00000451327 857 ntBASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 DUX4L50-201ENST00000455245 715 ntBASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 AP000358.1-201ENST00000456260 156 ntBASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 PARP8-206ENST00000503665 572 ntTSL 4 BASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 AC019193.1-201ENST00000506678 823 ntBASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 AC008723.1-201ENST00000506922 207 ntBASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 AC026410.1-201ENST00000507366 1101 ntBASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 NPM1P43-201ENST00000558669 786 ntBASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 AC107464.3-201ENST00000609172 737 ntBASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 RN7SL736P-201ENST00000613111 269 ntBASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 LINC01783-202ENST00000614408 828 ntBASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 AC103691.2-201ENST00000618824 433 ntBASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 BX284668.2-205ENST00000619677 828 ntBASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 IL4-204ENST00000622422 717 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 API5-208ENST00000531273 1868 ntTSL 2 BASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 AC005562.1-201ENST00000583030 3219 ntBASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
KRTAP4-3Q9BYR4 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms