Protein–RNA interactions for Protein: Q99674

CGREF1, Cell growth regulator with EF hand domain protein 1, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1Q99674 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CGREF1Q99674 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC13.77□□□□□ -0.21
CGREF1Q99674 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CGREF1Q99674 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CGREF1Q99674 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
CGREF1Q99674 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
CGREF1Q99674 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CGREF1Q99674 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
CGREF1Q99674 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
CGREF1Q99674 STK25-235ENST00000543554 2556 ntTSL 2 BASIC13.77□□□□□ -0.21
CGREF1Q99674 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CGREF1Q99674 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC13.76□□□□□ -0.21
CGREF1Q99674 MEX3B-202ENST00000558133 4333 ntBASIC13.76□□□□□ -0.21
CGREF1Q99674 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CGREF1Q99674 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
CGREF1Q99674 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CGREF1Q99674 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CGREF1Q99674 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CGREF1Q99674 TP73-207ENST00000378290 1831 ntTSL 2 BASIC13.76□□□□□ -0.21
CGREF1Q99674 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC13.76□□□□□ -0.21
CGREF1Q99674 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CGREF1Q99674 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CGREF1Q99674 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CGREF1Q99674 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC13.76□□□□□ -0.21
CGREF1Q99674 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CGREF1Q99674 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CGREF1Q99674 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CGREF1Q99674 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CGREF1Q99674 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC13.76□□□□□ -0.21
CGREF1Q99674 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CGREF1Q99674 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CGREF1Q99674 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC13.76□□□□□ -0.21
CGREF1Q99674 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC13.76□□□□□ -0.21
CGREF1Q99674 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC13.76□□□□□ -0.21
CGREF1Q99674 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC13.76□□□□□ -0.21
CGREF1Q99674 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC13.76□□□□□ -0.21
CGREF1Q99674 PNMT-202ENST00000394246 821 ntTSL 2 BASIC13.76□□□□□ -0.21
CGREF1Q99674 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CGREF1Q99674 AC087499.6-201ENST00000411576 835 ntBASIC13.76□□□□□ -0.21
CGREF1Q99674 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC13.76□□□□□ -0.21
CGREF1Q99674 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CGREF1Q99674 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC13.76□□□□□ -0.21
CGREF1Q99674 ELK1P1-201ENST00000485699 580 ntBASIC13.76□□□□□ -0.21
CGREF1Q99674 AC068587.3-201ENST00000526613 355 ntBASIC13.76□□□□□ -0.21
CGREF1Q99674 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CGREF1Q99674 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
CGREF1Q99674 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC13.76□□□□□ -0.21
CGREF1Q99674 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC13.76□□□□□ -0.21
CGREF1Q99674 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC13.76□□□□□ -0.21
CGREF1Q99674 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC13.76□□□□□ -0.21
CGREF1Q99674 AC005498.2-205ENST00000593218 784 ntBASIC13.76□□□□□ -0.21
CGREF1Q99674 AC106028.4-201ENST00000614509 607 ntBASIC13.76□□□□□ -0.21
CGREF1Q99674 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CGREF1Q99674 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CGREF1Q99674 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
CGREF1Q99674 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CGREF1Q99674 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
CGREF1Q99674 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC13.76□□□□□ -0.21
CGREF1Q99674 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
CGREF1Q99674 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC13.76□□□□□ -0.21
CGREF1Q99674 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CGREF1Q99674 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CGREF1Q99674 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CGREF1Q99674 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CGREF1Q99674 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CGREF1Q99674 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CGREF1Q99674 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
CGREF1Q99674 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CGREF1Q99674 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC13.75□□□□□ -0.21
CGREF1Q99674 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CGREF1Q99674 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CGREF1Q99674 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CGREF1Q99674 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC13.75□□□□□ -0.21
CGREF1Q99674 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC13.75□□□□□ -0.21
CGREF1Q99674 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC13.75□□□□□ -0.21
CGREF1Q99674 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CGREF1Q99674 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CGREF1Q99674 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CGREF1Q99674 AC019294.4-201ENST00000561777 2905 ntBASIC13.75□□□□□ -0.21
CGREF1Q99674 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CGREF1Q99674 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC13.75□□□□□ -0.21
CGREF1Q99674 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CGREF1Q99674 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
CGREF1Q99674 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CGREF1Q99674 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC13.75□□□□□ -0.21
CGREF1Q99674 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CGREF1Q99674 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CGREF1Q99674 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CGREF1Q99674 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC13.75□□□□□ -0.21
CGREF1Q99674 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CGREF1Q99674 RPF1-202ENST00000370656 724 ntTSL 2 BASIC13.75□□□□□ -0.21
CGREF1Q99674 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CGREF1Q99674 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
CGREF1Q99674 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC13.75□□□□□ -0.21
CGREF1Q99674 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC13.75□□□□□ -0.21
CGREF1Q99674 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC13.75□□□□□ -0.21
CGREF1Q99674 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC13.75□□□□□ -0.21
CGREF1Q99674 AC011495.1-201ENST00000498085 584 ntBASIC13.75□□□□□ -0.21
CGREF1Q99674 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC13.75□□□□□ -0.21
CGREF1Q99674 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms