Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC13.51□□□□□ -0.25
NUP43Q8NFH3 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NUP43Q8NFH3 DMBT1P1-203ENST00000636837 4628 ntBASIC13.51□□□□□ -0.25
NUP43Q8NFH3 LAP3P2-201ENST00000454686 1454 ntBASIC13.51□□□□□ -0.25
NUP43Q8NFH3 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC13.51□□□□□ -0.25
NUP43Q8NFH3 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
NUP43Q8NFH3 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NUP43Q8NFH3 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NUP43Q8NFH3 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NUP43Q8NFH3 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NUP43Q8NFH3 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NUP43Q8NFH3 MIR658-201ENST00000385210 100 ntBASIC13.51□□□□□ -0.25
NUP43Q8NFH3 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NUP43Q8NFH3 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
NUP43Q8NFH3 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
NUP43Q8NFH3 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC13.51□□□□□ -0.25
NUP43Q8NFH3 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC13.51□□□□□ -0.25
NUP43Q8NFH3 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC13.51□□□□□ -0.25
NUP43Q8NFH3 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC13.51□□□□□ -0.25
NUP43Q8NFH3 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NUP43Q8NFH3 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC13.51□□□□□ -0.25
NUP43Q8NFH3 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
NUP43Q8NFH3 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC13.51□□□□□ -0.25
NUP43Q8NFH3 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NUP43Q8NFH3 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
NUP43Q8NFH3 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NUP43Q8NFH3 CICP4-201ENST00000447359 2812 ntBASIC13.51□□□□□ -0.25
NUP43Q8NFH3 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC13.51□□□□□ -0.25
NUP43Q8NFH3 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NUP43Q8NFH3 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NUP43Q8NFH3 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC13.51□□□□□ -0.25
NUP43Q8NFH3 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC13.51□□□□□ -0.25
NUP43Q8NFH3 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
NUP43Q8NFH3 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NUP43Q8NFH3 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
NUP43Q8NFH3 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.51□□□□□ -0.25
NUP43Q8NFH3 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
NUP43Q8NFH3 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
NUP43Q8NFH3 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NUP43Q8NFH3 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NUP43Q8NFH3 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC13.5□□□□□ -0.25
NUP43Q8NFH3 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC13.5□□□□□ -0.25
NUP43Q8NFH3 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
NUP43Q8NFH3 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
NUP43Q8NFH3 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
NUP43Q8NFH3 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
NUP43Q8NFH3 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
NUP43Q8NFH3 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NUP43Q8NFH3 AC144522.1-201ENST00000625111 1658 ntBASIC13.5□□□□□ -0.25
NUP43Q8NFH3 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
NUP43Q8NFH3 PEG13-201ENST00000631594 5667 ntBASIC13.5□□□□□ -0.25
NUP43Q8NFH3 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
NUP43Q8NFH3 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NUP43Q8NFH3 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NUP43Q8NFH3 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
NUP43Q8NFH3 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC13.5□□□□□ -0.25
NUP43Q8NFH3 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NUP43Q8NFH3 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
NUP43Q8NFH3 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
NUP43Q8NFH3 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC13.5□□□□□ -0.25
NUP43Q8NFH3 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NUP43Q8NFH3 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NUP43Q8NFH3 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NUP43Q8NFH3 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
NUP43Q8NFH3 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC13.5□□□□□ -0.25
NUP43Q8NFH3 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC13.5□□□□□ -0.25
NUP43Q8NFH3 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC13.5□□□□□ -0.25
NUP43Q8NFH3 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
NUP43Q8NFH3 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC13.5□□□□□ -0.25
NUP43Q8NFH3 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
NUP43Q8NFH3 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
NUP43Q8NFH3 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC13.5□□□□□ -0.25
NUP43Q8NFH3 IGHV3-71-201ENST00000523324 359 ntBASIC13.5□□□□□ -0.25
NUP43Q8NFH3 PUDP-206ENST00000540122 825 ntTSL 2 BASIC13.5□□□□□ -0.25
NUP43Q8NFH3 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
NUP43Q8NFH3 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC13.5□□□□□ -0.25
NUP43Q8NFH3 AC124068.2-201ENST00000569473 1109 ntBASIC13.5□□□□□ -0.25
NUP43Q8NFH3 MIR4259-201ENST00000584466 101 ntBASIC13.5□□□□□ -0.25
NUP43Q8NFH3 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC13.5□□□□□ -0.25
NUP43Q8NFH3 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC13.5□□□□□ -0.25
NUP43Q8NFH3 MIR6805-201ENST00000615055 62 ntBASIC13.5□□□□□ -0.25
NUP43Q8NFH3 AC009542.2-202ENST00000619004 1067 ntBASIC13.5□□□□□ -0.25
NUP43Q8NFH3 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC13.5□□□□□ -0.25
NUP43Q8NFH3 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NUP43Q8NFH3 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC13.5□□□□□ -0.25
NUP43Q8NFH3 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC13.5□□□□□ -0.25
NUP43Q8NFH3 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC13.5□□□□□ -0.25
NUP43Q8NFH3 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
NUP43Q8NFH3 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
NUP43Q8NFH3 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.5□□□□□ -0.25
NUP43Q8NFH3 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC13.5□□□□□ -0.25
NUP43Q8NFH3 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.5□□□□□ -0.25
NUP43Q8NFH3 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
NUP43Q8NFH3 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC13.5□□□□□ -0.25
NUP43Q8NFH3 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NUP43Q8NFH3 LINC02486-201ENST00000604157 3000 ntBASIC13.5□□□□□ -0.25
NUP43Q8NFH3 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NUP43Q8NFH3 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NUP43Q8NFH3 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC13.5□□□□□ -0.25
NUP43Q8NFH3 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms