Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC13.62□□□□□ -0.23
CLIP4Q8N3C7 GNRHR2-203ENST00000581100 1187 ntBASIC13.62□□□□□ -0.23
CLIP4Q8N3C7 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
CLIP4Q8N3C7 BX088702.1-201ENST00000610784 235 ntBASIC13.62□□□□□ -0.23
CLIP4Q8N3C7 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC13.62□□□□□ -0.23
CLIP4Q8N3C7 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC13.62□□□□□ -0.23
CLIP4Q8N3C7 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC13.62□□□□□ -0.23
CLIP4Q8N3C7 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLIP4Q8N3C7 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLIP4Q8N3C7 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC13.62□□□□□ -0.23
CLIP4Q8N3C7 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC13.62□□□□□ -0.23
CLIP4Q8N3C7 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC13.62□□□□□ -0.23
CLIP4Q8N3C7 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC13.62□□□□□ -0.23
CLIP4Q8N3C7 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC13.62□□□□□ -0.23
CLIP4Q8N3C7 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CLIP4Q8N3C7 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLIP4Q8N3C7 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
CLIP4Q8N3C7 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLIP4Q8N3C7 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLIP4Q8N3C7 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC13.62□□□□□ -0.23
CLIP4Q8N3C7 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CLIP4Q8N3C7 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC13.62□□□□□ -0.23
CLIP4Q8N3C7 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC13.62□□□□□ -0.23
CLIP4Q8N3C7 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
CLIP4Q8N3C7 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CLIP4Q8N3C7 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CLIP4Q8N3C7 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLIP4Q8N3C7 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC13.61□□□□□ -0.23
CLIP4Q8N3C7 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CLIP4Q8N3C7 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CLIP4Q8N3C7 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
CLIP4Q8N3C7 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CLIP4Q8N3C7 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC13.61□□□□□ -0.23
CLIP4Q8N3C7 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CLIP4Q8N3C7 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC13.61□□□□□ -0.23
CLIP4Q8N3C7 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLIP4Q8N3C7 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CLIP4Q8N3C7 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLIP4Q8N3C7 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CLIP4Q8N3C7 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC13.61□□□□□ -0.23
CLIP4Q8N3C7 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLIP4Q8N3C7 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CLIP4Q8N3C7 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CLIP4Q8N3C7 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CLIP4Q8N3C7 RPL28-203ENST00000428193 573 ntTSL 2 BASIC13.61□□□□□ -0.23
CLIP4Q8N3C7 RPL28-204ENST00000431533 590 ntTSL 2 BASIC13.61□□□□□ -0.23
CLIP4Q8N3C7 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLIP4Q8N3C7 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC13.61□□□□□ -0.23
CLIP4Q8N3C7 RN7SL752P-201ENST00000463779 287 ntBASIC13.61□□□□□ -0.23
CLIP4Q8N3C7 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CLIP4Q8N3C7 NEU3-203ENST00000529024 581 ntTSL 3 BASIC13.61□□□□□ -0.23
CLIP4Q8N3C7 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC13.61□□□□□ -0.23
CLIP4Q8N3C7 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLIP4Q8N3C7 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC13.61□□□□□ -0.23
CLIP4Q8N3C7 RPL28-207ENST00000558815 616 ntTSL 2 BASIC13.61□□□□□ -0.23
CLIP4Q8N3C7 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC13.61□□□□□ -0.23
CLIP4Q8N3C7 COX11-202ENST00000571584 1108 ntTSL 2 BASIC13.61□□□□□ -0.23
CLIP4Q8N3C7 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC13.61□□□□□ -0.23
CLIP4Q8N3C7 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC13.61□□□□□ -0.23
CLIP4Q8N3C7 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLIP4Q8N3C7 TSN-212ENST00000536142 3328 ntTSL 2 BASIC13.61□□□□□ -0.23
CLIP4Q8N3C7 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC13.61□□□□□ -0.23
CLIP4Q8N3C7 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
CLIP4Q8N3C7 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLIP4Q8N3C7 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC13.61□□□□□ -0.23
CLIP4Q8N3C7 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CLIP4Q8N3C7 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC13.61□□□□□ -0.23
CLIP4Q8N3C7 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CLIP4Q8N3C7 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CLIP4Q8N3C7 MIR497HG-202ENST00000572453 3838 ntBASIC13.61□□□□□ -0.23
CLIP4Q8N3C7 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLIP4Q8N3C7 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC13.61□□□□□ -0.23
CLIP4Q8N3C7 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.61□□□□□ -0.23
CLIP4Q8N3C7 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC13.61□□□□□ -0.23
CLIP4Q8N3C7 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLIP4Q8N3C7 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
CLIP4Q8N3C7 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CLIP4Q8N3C7 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.61□□□□□ -0.23
CLIP4Q8N3C7 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLIP4Q8N3C7 GOLGA8VP-201ENST00000559009 1798 ntBASIC13.6□□□□□ -0.23
CLIP4Q8N3C7 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC13.6□□□□□ -0.23
CLIP4Q8N3C7 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
CLIP4Q8N3C7 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLIP4Q8N3C7 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLIP4Q8N3C7 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC13.6□□□□□ -0.23
CLIP4Q8N3C7 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC13.6□□□□□ -0.23
CLIP4Q8N3C7 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLIP4Q8N3C7 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLIP4Q8N3C7 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLIP4Q8N3C7 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CLIP4Q8N3C7 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLIP4Q8N3C7 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CLIP4Q8N3C7 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
CLIP4Q8N3C7 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC13.6□□□□□ -0.23
CLIP4Q8N3C7 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLIP4Q8N3C7 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLIP4Q8N3C7 TPM3P8-201ENST00000330554 643 ntBASIC13.6□□□□□ -0.23
CLIP4Q8N3C7 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLIP4Q8N3C7 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
CLIP4Q8N3C7 AC098614.1-201ENST00000368528 745 ntBASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms