Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 AC092171.5-201ENST00000608012 942 ntBASIC15.92■□□□□ 0.14
CCDC60Q8IWA6 AC007881.3-201ENST00000608897 607 ntBASIC15.92■□□□□ 0.14
CCDC60Q8IWA6 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC60Q8IWA6 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC60Q8IWA6 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC60Q8IWA6 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC15.92■□□□□ 0.14
CCDC60Q8IWA6 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC60Q8IWA6 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC60Q8IWA6 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC60Q8IWA6 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.92■□□□□ 0.14
CCDC60Q8IWA6 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC60Q8IWA6 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC60Q8IWA6 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
CCDC60Q8IWA6 AL365209.1-201ENST00000624418 6473 ntBASIC15.92■□□□□ 0.14
CCDC60Q8IWA6 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
CCDC60Q8IWA6 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.92■□□□□ 0.14
CCDC60Q8IWA6 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
CCDC60Q8IWA6 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CCDC60Q8IWA6 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC60Q8IWA6 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC60Q8IWA6 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC15.91■□□□□ 0.14
CCDC60Q8IWA6 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC60Q8IWA6 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC15.91■□□□□ 0.14
CCDC60Q8IWA6 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC60Q8IWA6 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC60Q8IWA6 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC60Q8IWA6 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC60Q8IWA6 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CCDC60Q8IWA6 AL591122.2-201ENST00000624125 1853 ntBASIC15.91■□□□□ 0.14
CCDC60Q8IWA6 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC60Q8IWA6 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC15.91■□□□□ 0.14
CCDC60Q8IWA6 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC60Q8IWA6 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC60Q8IWA6 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC60Q8IWA6 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC60Q8IWA6 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC60Q8IWA6 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
CCDC60Q8IWA6 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC15.91■□□□□ 0.14
CCDC60Q8IWA6 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CCDC60Q8IWA6 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC15.91■□□□□ 0.14
CCDC60Q8IWA6 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC60Q8IWA6 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC60Q8IWA6 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
CCDC60Q8IWA6 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC15.91■□□□□ 0.14
CCDC60Q8IWA6 AC084781.1-201ENST00000613737 656 ntBASIC15.91■□□□□ 0.14
CCDC60Q8IWA6 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC15.91■□□□□ 0.14
CCDC60Q8IWA6 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CCDC60Q8IWA6 AC009145.4-201ENST00000625119 1294 ntBASIC15.91■□□□□ 0.14
CCDC60Q8IWA6 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC60Q8IWA6 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CCDC60Q8IWA6 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC15.91■□□□□ 0.14
CCDC60Q8IWA6 CICP16-201ENST00000502609 2813 ntBASIC15.91■□□□□ 0.14
CCDC60Q8IWA6 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC60Q8IWA6 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CCDC60Q8IWA6 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC60Q8IWA6 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC60Q8IWA6 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC60Q8IWA6 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC60Q8IWA6 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC60Q8IWA6 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC60Q8IWA6 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.91■□□□□ 0.14
CCDC60Q8IWA6 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC60Q8IWA6 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC60Q8IWA6 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC60Q8IWA6 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC60Q8IWA6 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC15.91■□□□□ 0.14
CCDC60Q8IWA6 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC60Q8IWA6 AC020910.6-201ENST00000623084 1459 ntBASIC15.91■□□□□ 0.14
CCDC60Q8IWA6 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.9■□□□□ 0.14
CCDC60Q8IWA6 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CCDC60Q8IWA6 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC60Q8IWA6 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC60Q8IWA6 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC60Q8IWA6 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC60Q8IWA6 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC60Q8IWA6 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC60Q8IWA6 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC60Q8IWA6 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC60Q8IWA6 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC60Q8IWA6 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC60Q8IWA6 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC15.9■□□□□ 0.14
CCDC60Q8IWA6 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC60Q8IWA6 CHCHD2P9-201ENST00000461726 456 ntBASIC15.9■□□□□ 0.14
CCDC60Q8IWA6 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC60Q8IWA6 RPL18AP8-201ENST00000486071 528 ntBASIC15.9■□□□□ 0.14
CCDC60Q8IWA6 ORAOV1P1-201ENST00000503108 395 ntBASIC15.9■□□□□ 0.14
CCDC60Q8IWA6 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC15.9■□□□□ 0.14
CCDC60Q8IWA6 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC15.9■□□□□ 0.14
CCDC60Q8IWA6 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC15.9■□□□□ 0.14
CCDC60Q8IWA6 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC60Q8IWA6 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC15.9■□□□□ 0.14
CCDC60Q8IWA6 AL133467.4-201ENST00000602953 725 ntBASIC15.9■□□□□ 0.14
CCDC60Q8IWA6 AL021707.6-201ENST00000609212 491 ntBASIC15.9■□□□□ 0.14
CCDC60Q8IWA6 MIR6842-201ENST00000612539 65 ntBASIC15.9■□□□□ 0.14
CCDC60Q8IWA6 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC60Q8IWA6 RETN-203ENST00000629642 400 ntTSL 5 BASIC15.9■□□□□ 0.14
CCDC60Q8IWA6 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC60Q8IWA6 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC60Q8IWA6 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC15.9■□□□□ 0.14
CCDC60Q8IWA6 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms