Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 MT2A-202ENST00000561491 581 ntTSL 2 BASIC15.25■□□□□ 0.03
NPAS4Q8IUM7 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC15.25■□□□□ 0.03
NPAS4Q8IUM7 NT5C-204ENST00000578337 582 ntTSL 2 BASIC15.25■□□□□ 0.03
NPAS4Q8IUM7 AC008972.2-201ENST00000606587 494 ntBASIC15.25■□□□□ 0.03
NPAS4Q8IUM7 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC15.25■□□□□ 0.03
NPAS4Q8IUM7 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
NPAS4Q8IUM7 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPAS4Q8IUM7 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
NPAS4Q8IUM7 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPAS4Q8IUM7 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPAS4Q8IUM7 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.25■□□□□ 0.03
NPAS4Q8IUM7 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.25■□□□□ 0.03
NPAS4Q8IUM7 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.25■□□□□ 0.03
NPAS4Q8IUM7 FGD5P1-202ENST00000614866 2498 ntBASIC15.25■□□□□ 0.03
NPAS4Q8IUM7 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.25■□□□□ 0.03
NPAS4Q8IUM7 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.25■□□□□ 0.03
NPAS4Q8IUM7 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPAS4Q8IUM7 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
NPAS4Q8IUM7 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
NPAS4Q8IUM7 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
NPAS4Q8IUM7 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NPAS4Q8IUM7 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPAS4Q8IUM7 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
NPAS4Q8IUM7 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.25■□□□□ 0.03
NPAS4Q8IUM7 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC15.25■□□□□ 0.03
NPAS4Q8IUM7 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPAS4Q8IUM7 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NPAS4Q8IUM7 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
NPAS4Q8IUM7 TBC1D27-202ENST00000424239 1573 ntBASIC15.24■□□□□ 0.03
NPAS4Q8IUM7 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
NPAS4Q8IUM7 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NPAS4Q8IUM7 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPAS4Q8IUM7 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
NPAS4Q8IUM7 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPAS4Q8IUM7 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC15.24■□□□□ 0.03
NPAS4Q8IUM7 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC15.24■□□□□ 0.03
NPAS4Q8IUM7 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NPAS4Q8IUM7 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
NPAS4Q8IUM7 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
NPAS4Q8IUM7 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPAS4Q8IUM7 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPAS4Q8IUM7 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPAS4Q8IUM7 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
NPAS4Q8IUM7 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPAS4Q8IUM7 NME4-203ENST00000397722 1232 ntTSL 2 BASIC15.24■□□□□ 0.03
NPAS4Q8IUM7 KRT18P62-201ENST00000446618 1287 ntBASIC15.24■□□□□ 0.03
NPAS4Q8IUM7 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC15.24■□□□□ 0.03
NPAS4Q8IUM7 KRT18P15-201ENST00000458108 1291 ntBASIC15.24■□□□□ 0.03
NPAS4Q8IUM7 RPS23-207ENST00000511844 530 ntTSL 2 BASIC15.24■□□□□ 0.03
NPAS4Q8IUM7 FOXN3-AS2-201ENST00000554071 1262 ntBASIC15.24■□□□□ 0.03
NPAS4Q8IUM7 AL132994.1-201ENST00000554098 400 ntBASIC15.24■□□□□ 0.03
NPAS4Q8IUM7 GOLGA2P7-209ENST00000560408 745 ntBASIC15.24■□□□□ 0.03
NPAS4Q8IUM7 USB1-205ENST00000561743 1135 ntTSL 3 BASIC15.24■□□□□ 0.03
NPAS4Q8IUM7 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC15.24■□□□□ 0.03
NPAS4Q8IUM7 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC15.24■□□□□ 0.03
NPAS4Q8IUM7 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC15.24■□□□□ 0.03
NPAS4Q8IUM7 AC132825.4-202ENST00000578792 434 ntBASIC15.24■□□□□ 0.03
NPAS4Q8IUM7 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC15.24■□□□□ 0.03
NPAS4Q8IUM7 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
NPAS4Q8IUM7 PEBP1P2-201ENST00000603980 558 ntBASIC15.24■□□□□ 0.03
NPAS4Q8IUM7 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC15.24■□□□□ 0.03
NPAS4Q8IUM7 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
NPAS4Q8IUM7 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC15.24■□□□□ 0.03
NPAS4Q8IUM7 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPAS4Q8IUM7 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPAS4Q8IUM7 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPAS4Q8IUM7 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NPAS4Q8IUM7 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NPAS4Q8IUM7 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NPAS4Q8IUM7 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.24■□□□□ 0.03
NPAS4Q8IUM7 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC15.24■□□□□ 0.03
NPAS4Q8IUM7 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NPAS4Q8IUM7 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NPAS4Q8IUM7 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC15.24■□□□□ 0.03
NPAS4Q8IUM7 GSN-209ENST00000449733 2702 ntTSL 2 BASIC15.23■□□□□ 0.03
NPAS4Q8IUM7 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPAS4Q8IUM7 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPAS4Q8IUM7 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPAS4Q8IUM7 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC15.23■□□□□ 0.03
NPAS4Q8IUM7 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NPAS4Q8IUM7 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
NPAS4Q8IUM7 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.23■□□□□ 0.03
NPAS4Q8IUM7 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC15.23■□□□□ 0.03
NPAS4Q8IUM7 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NPAS4Q8IUM7 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC15.23■□□□□ 0.03
NPAS4Q8IUM7 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPAS4Q8IUM7 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
NPAS4Q8IUM7 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
NPAS4Q8IUM7 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPAS4Q8IUM7 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
NPAS4Q8IUM7 COX20P1-201ENST00000366529 357 ntBASIC15.23■□□□□ 0.03
NPAS4Q8IUM7 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
NPAS4Q8IUM7 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
NPAS4Q8IUM7 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC15.23■□□□□ 0.03
NPAS4Q8IUM7 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC15.23■□□□□ 0.03
NPAS4Q8IUM7 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC15.23■□□□□ 0.03
NPAS4Q8IUM7 AC025186.1-201ENST00000478174 870 ntBASIC15.23■□□□□ 0.03
NPAS4Q8IUM7 EEF1GP8-201ENST00000506566 1154 ntBASIC15.23■□□□□ 0.03
NPAS4Q8IUM7 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC15.23■□□□□ 0.03
NPAS4Q8IUM7 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms