Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM53Q6P2H8 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM53Q6P2H8 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC13.36□□□□□ -0.27
TMEM53Q6P2H8 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM53Q6P2H8 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC13.36□□□□□ -0.27
TMEM53Q6P2H8 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC13.36□□□□□ -0.27
TMEM53Q6P2H8 RN7SL692P-201ENST00000464677 288 ntBASIC13.36□□□□□ -0.27
TMEM53Q6P2H8 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
TMEM53Q6P2H8 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM53Q6P2H8 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
TMEM53Q6P2H8 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC13.36□□□□□ -0.27
TMEM53Q6P2H8 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
TMEM53Q6P2H8 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC13.36□□□□□ -0.27
TMEM53Q6P2H8 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC13.36□□□□□ -0.27
TMEM53Q6P2H8 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC13.36□□□□□ -0.27
TMEM53Q6P2H8 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13.36□□□□□ -0.27
TMEM53Q6P2H8 TMEM147-AS1-205ENST00000590717 3300 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM53Q6P2H8 AC131212.3-201ENST00000624087 4219 ntBASIC13.36□□□□□ -0.27
TMEM53Q6P2H8 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
TMEM53Q6P2H8 PNPLA8-206ENST00000436062 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM53Q6P2H8 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
TMEM53Q6P2H8 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
TMEM53Q6P2H8 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
TMEM53Q6P2H8 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM53Q6P2H8 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
TMEM53Q6P2H8 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM53Q6P2H8 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM53Q6P2H8 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM53Q6P2H8 TBX3-201ENST00000257566 4208 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM53Q6P2H8 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
TMEM53Q6P2H8 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM53Q6P2H8 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM53Q6P2H8 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM53Q6P2H8 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.36□□□□□ -0.27
TMEM53Q6P2H8 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
TMEM53Q6P2H8 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC13.36□□□□□ -0.27
TMEM53Q6P2H8 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.36□□□□□ -0.27
TMEM53Q6P2H8 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM53Q6P2H8 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC13.36□□□□□ -0.27
TMEM53Q6P2H8 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.36□□□□□ -0.27
TMEM53Q6P2H8 RBM19-201ENST00000261741 4194 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM53Q6P2H8 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
TMEM53Q6P2H8 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.35□□□□□ -0.27
TMEM53Q6P2H8 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM53Q6P2H8 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC13.35□□□□□ -0.27
TMEM53Q6P2H8 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
TMEM53Q6P2H8 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM53Q6P2H8 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
TMEM53Q6P2H8 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.35□□□□□ -0.27
TMEM53Q6P2H8 TAX1BP1-207ENST00000433216 3174 ntTSL 2 BASIC13.35□□□□□ -0.27
TMEM53Q6P2H8 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC13.35□□□□□ -0.27
TMEM53Q6P2H8 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM53Q6P2H8 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM53Q6P2H8 FAM90A11P-201ENST00000518378 2218 ntBASIC13.35□□□□□ -0.27
TMEM53Q6P2H8 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM53Q6P2H8 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
TMEM53Q6P2H8 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM53Q6P2H8 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.35□□□□□ -0.27
TMEM53Q6P2H8 C22orf39-202ENST00000399562 3350 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM53Q6P2H8 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
TMEM53Q6P2H8 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM53Q6P2H8 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM53Q6P2H8 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.35□□□□□ -0.27
TMEM53Q6P2H8 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM53Q6P2H8 CALY-203ENST00000368558 825 ntTSL 5 BASIC13.35□□□□□ -0.27
TMEM53Q6P2H8 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
TMEM53Q6P2H8 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.35□□□□□ -0.27
TMEM53Q6P2H8 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
TMEM53Q6P2H8 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM53Q6P2H8 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC13.35□□□□□ -0.27
TMEM53Q6P2H8 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC13.35□□□□□ -0.27
TMEM53Q6P2H8 AC114812.1-204ENST00000449669 728 ntBASIC13.35□□□□□ -0.27
TMEM53Q6P2H8 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC13.35□□□□□ -0.27
TMEM53Q6P2H8 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
TMEM53Q6P2H8 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC13.35□□□□□ -0.27
TMEM53Q6P2H8 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC13.35□□□□□ -0.27
TMEM53Q6P2H8 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC13.35□□□□□ -0.27
TMEM53Q6P2H8 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.35□□□□□ -0.27
TMEM53Q6P2H8 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.35□□□□□ -0.27
TMEM53Q6P2H8 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM53Q6P2H8 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC13.35□□□□□ -0.27
TMEM53Q6P2H8 AP005019.2-201ENST00000615104 511 ntBASIC13.35□□□□□ -0.27
TMEM53Q6P2H8 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
TMEM53Q6P2H8 FAM76A-204ENST00000373954 3567 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM53Q6P2H8 AC004834.1-202ENST00000638785 1737 ntTSL 5 BASIC13.35□□□□□ -0.27
TMEM53Q6P2H8 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM53Q6P2H8 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM53Q6P2H8 PAM-203ENST00000346918 3302 ntTSL 5 BASIC13.35□□□□□ -0.27
TMEM53Q6P2H8 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
TMEM53Q6P2H8 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM53Q6P2H8 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM53Q6P2H8 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM53Q6P2H8 SPINT1-201ENST00000344051 3056 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM53Q6P2H8 AL360270.3-201ENST00000609118 1348 ntBASIC13.35□□□□□ -0.27
TMEM53Q6P2H8 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM53Q6P2H8 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM53Q6P2H8 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM53Q6P2H8 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM53Q6P2H8 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM53Q6P2H8 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms