Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LYSMD4Q5XG99 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC13.97□□□□□ -0.17
LYSMD4Q5XG99 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
LYSMD4Q5XG99 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC13.97□□□□□ -0.17
LYSMD4Q5XG99 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.97□□□□□ -0.17
LYSMD4Q5XG99 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC13.97□□□□□ -0.17
LYSMD4Q5XG99 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
LYSMD4Q5XG99 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
LYSMD4Q5XG99 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LYSMD4Q5XG99 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LYSMD4Q5XG99 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LYSMD4Q5XG99 PTGER4P2-201ENST00000328411 252 ntBASIC13.97□□□□□ -0.17
LYSMD4Q5XG99 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LYSMD4Q5XG99 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
LYSMD4Q5XG99 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC13.97□□□□□ -0.17
LYSMD4Q5XG99 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC13.97□□□□□ -0.17
LYSMD4Q5XG99 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC13.97□□□□□ -0.17
LYSMD4Q5XG99 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC13.97□□□□□ -0.17
LYSMD4Q5XG99 PTGER4P3-201ENST00000458150 252 ntBASIC13.97□□□□□ -0.17
LYSMD4Q5XG99 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC13.97□□□□□ -0.17
LYSMD4Q5XG99 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC13.97□□□□□ -0.17
LYSMD4Q5XG99 CASP3-205ENST00000517513 964 ntTSL 5 BASIC13.97□□□□□ -0.17
LYSMD4Q5XG99 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
LYSMD4Q5XG99 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC13.97□□□□□ -0.17
LYSMD4Q5XG99 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC13.97□□□□□ -0.17
LYSMD4Q5XG99 BATF-202ENST00000555504 361 ntTSL 2 BASIC13.97□□□□□ -0.17
LYSMD4Q5XG99 CES1P2-201ENST00000566467 1242 ntBASIC13.97□□□□□ -0.17
LYSMD4Q5XG99 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC13.97□□□□□ -0.17
LYSMD4Q5XG99 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC13.97□□□□□ -0.17
LYSMD4Q5XG99 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LYSMD4Q5XG99 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LYSMD4Q5XG99 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
LYSMD4Q5XG99 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LYSMD4Q5XG99 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
LYSMD4Q5XG99 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LYSMD4Q5XG99 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC13.97□□□□□ -0.17
LYSMD4Q5XG99 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LYSMD4Q5XG99 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LYSMD4Q5XG99 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LYSMD4Q5XG99 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LYSMD4Q5XG99 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LYSMD4Q5XG99 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC13.97□□□□□ -0.17
LYSMD4Q5XG99 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC13.96□□□□□ -0.17
LYSMD4Q5XG99 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LYSMD4Q5XG99 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LYSMD4Q5XG99 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LYSMD4Q5XG99 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.96□□□□□ -0.17
LYSMD4Q5XG99 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.96□□□□□ -0.17
LYSMD4Q5XG99 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC13.96□□□□□ -0.17
LYSMD4Q5XG99 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC13.96□□□□□ -0.17
LYSMD4Q5XG99 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LYSMD4Q5XG99 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LYSMD4Q5XG99 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC13.96□□□□□ -0.17
LYSMD4Q5XG99 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LYSMD4Q5XG99 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LYSMD4Q5XG99 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LYSMD4Q5XG99 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC13.96□□□□□ -0.17
LYSMD4Q5XG99 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC13.96□□□□□ -0.17
LYSMD4Q5XG99 ACTBP7-201ENST00000418351 1124 ntBASIC13.96□□□□□ -0.17
LYSMD4Q5XG99 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LYSMD4Q5XG99 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC13.96□□□□□ -0.17
LYSMD4Q5XG99 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC13.96□□□□□ -0.17
LYSMD4Q5XG99 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LYSMD4Q5XG99 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC13.96□□□□□ -0.17
LYSMD4Q5XG99 PFN2-212ENST00000490975 858 ntTSL 4 BASIC13.96□□□□□ -0.17
LYSMD4Q5XG99 AC093300.1-201ENST00000510368 1201 ntBASIC13.96□□□□□ -0.17
LYSMD4Q5XG99 GDNF-207ENST00000515058 764 ntTSL 5 BASIC13.96□□□□□ -0.17
LYSMD4Q5XG99 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC13.96□□□□□ -0.17
LYSMD4Q5XG99 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.96□□□□□ -0.17
LYSMD4Q5XG99 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
LYSMD4Q5XG99 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC13.96□□□□□ -0.17
LYSMD4Q5XG99 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC13.96□□□□□ -0.17
LYSMD4Q5XG99 COQ4-204ENST00000608951 781 ntTSL 2 BASIC13.96□□□□□ -0.17
LYSMD4Q5XG99 AP000769.1-203ENST00000637245 208 ntBASIC13.96□□□□□ -0.17
LYSMD4Q5XG99 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LYSMD4Q5XG99 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC13.96□□□□□ -0.17
LYSMD4Q5XG99 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC13.96□□□□□ -0.17
LYSMD4Q5XG99 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.96□□□□□ -0.17
LYSMD4Q5XG99 AL365181.1-201ENST00000564032 1828 ntBASIC13.96□□□□□ -0.17
LYSMD4Q5XG99 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LYSMD4Q5XG99 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LYSMD4Q5XG99 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
LYSMD4Q5XG99 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
LYSMD4Q5XG99 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
LYSMD4Q5XG99 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LYSMD4Q5XG99 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LYSMD4Q5XG99 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LYSMD4Q5XG99 AGAP7P-201ENST00000582299 2062 ntBASIC13.95□□□□□ -0.18
LYSMD4Q5XG99 AGAP14-201ENST00000624701 2060 ntBASIC13.95□□□□□ -0.18
LYSMD4Q5XG99 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
LYSMD4Q5XG99 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
LYSMD4Q5XG99 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
LYSMD4Q5XG99 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LYSMD4Q5XG99 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC13.95□□□□□ -0.18
LYSMD4Q5XG99 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC13.95□□□□□ -0.18
LYSMD4Q5XG99 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
LYSMD4Q5XG99 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
LYSMD4Q5XG99 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
LYSMD4Q5XG99 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LYSMD4Q5XG99 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms