Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.8□□□□□ -0.04
ALFQ53S48 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ALFQ53S48 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ALFQ53S48 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC14.8□□□□□ -0.04
ALFQ53S48 CCT8L1P-201ENST00000465400 1674 ntBASIC14.8□□□□□ -0.04
ALFQ53S48 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ALFQ53S48 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
ALFQ53S48 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
ALFQ53S48 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC14.8□□□□□ -0.04
ALFQ53S48 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ALFQ53S48 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ALFQ53S48 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ALFQ53S48 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ALFQ53S48 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ALFQ53S48 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ALFQ53S48 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
ALFQ53S48 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ALFQ53S48 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ALFQ53S48 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ALFQ53S48 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ALFQ53S48 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ALFQ53S48 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ALFQ53S48 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
ALFQ53S48 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ALFQ53S48 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
ALFQ53S48 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
ALFQ53S48 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ALFQ53S48 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
ALFQ53S48 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ALFQ53S48 RNA5SP359-201ENST00000364838 113 ntBASIC14.79□□□□□ -0.04
ALFQ53S48 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
ALFQ53S48 AC239868.1-201ENST00000369385 493 ntBASIC14.79□□□□□ -0.04
ALFQ53S48 NCR3-202ENST00000376071 541 ntTSL 5 BASIC14.79□□□□□ -0.04
ALFQ53S48 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
ALFQ53S48 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ALFQ53S48 LBH-202ENST00000401506 485 ntTSL 3 BASIC14.79□□□□□ -0.04
ALFQ53S48 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
ALFQ53S48 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
ALFQ53S48 NME6-203ENST00000415644 849 ntTSL 2 BASIC14.79□□□□□ -0.04
ALFQ53S48 BCYRN1-201ENST00000418539 200 ntBASIC14.79□□□□□ -0.04
ALFQ53S48 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
ALFQ53S48 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
ALFQ53S48 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC14.79□□□□□ -0.04
ALFQ53S48 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC14.79□□□□□ -0.04
ALFQ53S48 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.79□□□□□ -0.04
ALFQ53S48 IGHJ2P-201ENST00000454480 60 ntBASIC14.79□□□□□ -0.04
ALFQ53S48 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC14.79□□□□□ -0.04
ALFQ53S48 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ALFQ53S48 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
ALFQ53S48 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC14.79□□□□□ -0.04
ALFQ53S48 IGHV3OR16-16-201ENST00000563644 343 ntBASIC14.79□□□□□ -0.04
ALFQ53S48 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ALFQ53S48 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC14.79□□□□□ -0.04
ALFQ53S48 MIR3188-201ENST00000583494 85 ntBASIC14.79□□□□□ -0.04
ALFQ53S48 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.79□□□□□ -0.04
ALFQ53S48 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC14.79□□□□□ -0.04
ALFQ53S48 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ALFQ53S48 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC14.79□□□□□ -0.04
ALFQ53S48 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
ALFQ53S48 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
ALFQ53S48 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
ALFQ53S48 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
ALFQ53S48 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.79□□□□□ -0.04
ALFQ53S48 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.79□□□□□ -0.04
ALFQ53S48 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
ALFQ53S48 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ALFQ53S48 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ALFQ53S48 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
ALFQ53S48 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ALFQ53S48 AC016397.2-201ENST00000624848 1985 ntBASIC14.78□□□□□ -0.04
ALFQ53S48 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
ALFQ53S48 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ALFQ53S48 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
ALFQ53S48 AC015909.3-201ENST00000572855 1794 ntBASIC14.78□□□□□ -0.04
ALFQ53S48 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ALFQ53S48 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC14.78□□□□□ -0.04
ALFQ53S48 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ALFQ53S48 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ALFQ53S48 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC14.78□□□□□ -0.04
ALFQ53S48 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ALFQ53S48 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC14.78□□□□□ -0.04
ALFQ53S48 AC073150.1-201ENST00000450406 1084 ntBASIC14.78□□□□□ -0.04
ALFQ53S48 AC012618.1-201ENST00000461223 412 ntBASIC14.78□□□□□ -0.04
ALFQ53S48 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC14.78□□□□□ -0.04
ALFQ53S48 AC140658.4-201ENST00000561990 352 ntBASIC14.78□□□□□ -0.04
ALFQ53S48 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.78□□□□□ -0.04
ALFQ53S48 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ALFQ53S48 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC14.78□□□□□ -0.04
ALFQ53S48 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC14.78□□□□□ -0.04
ALFQ53S48 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC14.78□□□□□ -0.04
ALFQ53S48 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC14.78□□□□□ -0.04
ALFQ53S48 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
ALFQ53S48 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ALFQ53S48 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
ALFQ53S48 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ALFQ53S48 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
ALFQ53S48 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
ALFQ53S48 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ALFQ53S48 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
ALFQ53S48 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms