Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
SSBP1Q04837 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SSBP1Q04837 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SSBP1Q04837 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC12.22□□□□□ -0.45
SSBP1Q04837 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC12.22□□□□□ -0.45
SSBP1Q04837 CICP1-201ENST00000416803 2410 ntBASIC12.22□□□□□ -0.45
SSBP1Q04837 SLC45A2-201ENST00000296589 1772 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SSBP1Q04837 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
SSBP1Q04837 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
SSBP1Q04837 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SSBP1Q04837 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
SSBP1Q04837 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
SSBP1Q04837 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
SSBP1Q04837 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SSBP1Q04837 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
SSBP1Q04837 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC12.22□□□□□ -0.45
SSBP1Q04837 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
SSBP1Q04837 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC12.22□□□□□ -0.45
SSBP1Q04837 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC12.21□□□□□ -0.45
SSBP1Q04837 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC12.21□□□□□ -0.45
SSBP1Q04837 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SSBP1Q04837 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC12.21□□□□□ -0.45
SSBP1Q04837 C2-209ENST00000452323 1999 ntTSL 2 BASIC12.21□□□□□ -0.45
SSBP1Q04837 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
SSBP1Q04837 AC025183.3-201ENST00000623526 1482 ntBASIC12.21□□□□□ -0.45
SSBP1Q04837 GOLGA2P5-201ENST00000266746 2395 ntBASIC12.21□□□□□ -0.45
SSBP1Q04837 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
SSBP1Q04837 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SSBP1Q04837 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
SSBP1Q04837 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
SSBP1Q04837 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
SSBP1Q04837 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
SSBP1Q04837 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SSBP1Q04837 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SSBP1Q04837 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC12.21□□□□□ -0.45
SSBP1Q04837 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
SSBP1Q04837 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SSBP1Q04837 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SSBP1Q04837 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
SSBP1Q04837 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC12.21□□□□□ -0.45
SSBP1Q04837 GAS5-209ENST00000430245 723 ntTSL 3 BASIC12.21□□□□□ -0.45
SSBP1Q04837 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC12.21□□□□□ -0.45
SSBP1Q04837 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC12.21□□□□□ -0.45
SSBP1Q04837 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC12.21□□□□□ -0.45
SSBP1Q04837 AC069120.2-201ENST00000524091 540 ntBASIC12.21□□□□□ -0.45
SSBP1Q04837 AC027369.6-201ENST00000525520 931 ntBASIC12.21□□□□□ -0.45
SSBP1Q04837 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC12.21□□□□□ -0.45
SSBP1Q04837 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
SSBP1Q04837 RRP7BP-205ENST00000566851 833 ntBASIC12.21□□□□□ -0.45
SSBP1Q04837 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC12.21□□□□□ -0.45
SSBP1Q04837 PAM16-211ENST00000575848 518 ntTSL 3 BASIC12.21□□□□□ -0.45
SSBP1Q04837 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
SSBP1Q04837 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC12.21□□□□□ -0.45
SSBP1Q04837 MIR4469-201ENST00000583919 79 ntBASIC12.21□□□□□ -0.45
SSBP1Q04837 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC12.21□□□□□ -0.45
SSBP1Q04837 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SSBP1Q04837 SALL4P6-201ENST00000429385 1691 ntBASIC12.21□□□□□ -0.45
SSBP1Q04837 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SSBP1Q04837 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
SSBP1Q04837 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC12.21□□□□□ -0.46
SSBP1Q04837 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
SSBP1Q04837 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
SSBP1Q04837 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC12.21□□□□□ -0.46
SSBP1Q04837 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
SSBP1Q04837 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC12.21□□□□□ -0.46
SSBP1Q04837 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
SSBP1Q04837 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
SSBP1Q04837 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
SSBP1Q04837 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC12.21□□□□□ -0.46
SSBP1Q04837 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
SSBP1Q04837 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.46
SSBP1Q04837 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC12.21□□□□□ -0.46
SSBP1Q04837 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC12.21□□□□□ -0.46
SSBP1Q04837 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC12.21□□□□□ -0.46
SSBP1Q04837 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SSBP1Q04837 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SSBP1Q04837 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
SSBP1Q04837 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SSBP1Q04837 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SSBP1Q04837 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SSBP1Q04837 KLF7-204ENST00000423015 1788 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SSBP1Q04837 AL445209.1-201ENST00000607269 3491 ntBASIC12.2□□□□□ -0.46
SSBP1Q04837 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC12.2□□□□□ -0.46
SSBP1Q04837 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC12.2□□□□□ -0.46
SSBP1Q04837 GJB5-201ENST00000338513 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SSBP1Q04837 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC12.2□□□□□ -0.46
SSBP1Q04837 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC12.2□□□□□ -0.46
SSBP1Q04837 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SSBP1Q04837 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SSBP1Q04837 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC12.2□□□□□ -0.46
SSBP1Q04837 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SSBP1Q04837 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC12.2□□□□□ -0.46
SSBP1Q04837 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
SSBP1Q04837 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SSBP1Q04837 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC12.2□□□□□ -0.46
SSBP1Q04837 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
SSBP1Q04837 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SSBP1Q04837 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC12.2□□□□□ -0.46
SSBP1Q04837 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SSBP1Q04837 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms