Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
H3F3AP84243 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
H3F3AP84243 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
H3F3AP84243 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC12.9□□□□□ -0.34
H3F3AP84243 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
H3F3AP84243 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
H3F3AP84243 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC12.9□□□□□ -0.34
H3F3AP84243 TET3-201ENST00000305799 5174 ntTSL 5 BASIC12.9□□□□□ -0.35
H3F3AP84243 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.35
H3F3AP84243 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
H3F3AP84243 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
H3F3AP84243 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
H3F3AP84243 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
H3F3AP84243 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
H3F3AP84243 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC12.89□□□□□ -0.35
H3F3AP84243 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC12.89□□□□□ -0.35
H3F3AP84243 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
H3F3AP84243 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
H3F3AP84243 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
H3F3AP84243 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC12.89□□□□□ -0.35
H3F3AP84243 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
H3F3AP84243 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
H3F3AP84243 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
H3F3AP84243 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC12.89□□□□□ -0.35
H3F3AP84243 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
H3F3AP84243 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC12.89□□□□□ -0.35
H3F3AP84243 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
H3F3AP84243 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
H3F3AP84243 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
H3F3AP84243 KRT8P13-201ENST00000463294 1010 ntBASIC12.89□□□□□ -0.35
H3F3AP84243 AC125604.1-201ENST00000496255 707 ntBASIC12.89□□□□□ -0.35
H3F3AP84243 AC140658.4-201ENST00000561990 352 ntBASIC12.89□□□□□ -0.35
H3F3AP84243 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC12.89□□□□□ -0.35
H3F3AP84243 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
H3F3AP84243 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC12.89□□□□□ -0.35
H3F3AP84243 AC092299.1-201ENST00000632679 757 ntBASIC12.89□□□□□ -0.35
H3F3AP84243 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
H3F3AP84243 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
H3F3AP84243 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
H3F3AP84243 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
H3F3AP84243 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC12.89□□□□□ -0.35
H3F3AP84243 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
H3F3AP84243 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
H3F3AP84243 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC12.89□□□□□ -0.35
H3F3AP84243 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
H3F3AP84243 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC12.89□□□□□ -0.35
H3F3AP84243 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
H3F3AP84243 UCKL1-AS1-201ENST00000623569 3602 ntBASIC12.89□□□□□ -0.35
H3F3AP84243 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
H3F3AP84243 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
H3F3AP84243 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
H3F3AP84243 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
H3F3AP84243 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
H3F3AP84243 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
H3F3AP84243 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
H3F3AP84243 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC12.89□□□□□ -0.35
H3F3AP84243 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC12.89□□□□□ -0.35
H3F3AP84243 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
H3F3AP84243 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
H3F3AP84243 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
H3F3AP84243 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
H3F3AP84243 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
H3F3AP84243 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC12.88□□□□□ -0.35
H3F3AP84243 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
H3F3AP84243 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
H3F3AP84243 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
H3F3AP84243 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
H3F3AP84243 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC12.88□□□□□ -0.35
H3F3AP84243 ARHGAP23P1-201ENST00000562773 1937 ntBASIC12.88□□□□□ -0.35
H3F3AP84243 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
H3F3AP84243 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC12.88□□□□□ -0.35
H3F3AP84243 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
H3F3AP84243 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
H3F3AP84243 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
H3F3AP84243 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
H3F3AP84243 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
H3F3AP84243 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
H3F3AP84243 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC12.88□□□□□ -0.35
H3F3AP84243 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
H3F3AP84243 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
H3F3AP84243 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
H3F3AP84243 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
H3F3AP84243 JTB-202ENST00000356648 1040 ntTSL 2 BASIC12.88□□□□□ -0.35
H3F3AP84243 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
H3F3AP84243 AC016700.1-201ENST00000429424 312 ntBASIC12.88□□□□□ -0.35
H3F3AP84243 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
H3F3AP84243 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
H3F3AP84243 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC12.88□□□□□ -0.35
H3F3AP84243 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
H3F3AP84243 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
H3F3AP84243 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
H3F3AP84243 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC12.88□□□□□ -0.35
H3F3AP84243 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC12.88□□□□□ -0.35
H3F3AP84243 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC12.88□□□□□ -0.35
H3F3AP84243 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
H3F3AP84243 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
H3F3AP84243 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
H3F3AP84243 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC12.88□□□□□ -0.35
H3F3AP84243 AC138649.2-201ENST00000615886 705 ntBASIC12.88□□□□□ -0.35
H3F3AP84243 RAN-210ENST00000541630 1475 ntTSL 2 BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms