Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
UBA52P62987 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
UBA52P62987 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
UBA52P62987 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC12.57□□□□□ -0.4
UBA52P62987 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
UBA52P62987 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
UBA52P62987 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC12.57□□□□□ -0.4
UBA52P62987 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC12.57□□□□□ -0.4
UBA52P62987 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
UBA52P62987 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
UBA52P62987 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
UBA52P62987 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
UBA52P62987 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
UBA52P62987 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC12.57□□□□□ -0.4
UBA52P62987 CROT-203ENST00000419147 2959 ntTSL 2 BASIC12.57□□□□□ -0.4
UBA52P62987 KRT18P64-201ENST00000434946 1219 ntBASIC12.57□□□□□ -0.4
UBA52P62987 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC12.57□□□□□ -0.4
UBA52P62987 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC12.57□□□□□ -0.4
UBA52P62987 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC12.57□□□□□ -0.4
UBA52P62987 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC12.57□□□□□ -0.4
UBA52P62987 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC12.57□□□□□ -0.4
UBA52P62987 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC12.57□□□□□ -0.4
UBA52P62987 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC12.57□□□□□ -0.4
UBA52P62987 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC12.57□□□□□ -0.4
UBA52P62987 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC12.57□□□□□ -0.4
UBA52P62987 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC12.57□□□□□ -0.4
UBA52P62987 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
UBA52P62987 AC243960.2-201ENST00000600996 747 ntBASIC12.57□□□□□ -0.4
UBA52P62987 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC12.57□□□□□ -0.4
UBA52P62987 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
UBA52P62987 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
UBA52P62987 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
UBA52P62987 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
UBA52P62987 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC12.57□□□□□ -0.4
UBA52P62987 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
UBA52P62987 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC12.57□□□□□ -0.4
UBA52P62987 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
UBA52P62987 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
UBA52P62987 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
UBA52P62987 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
UBA52P62987 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC12.57□□□□□ -0.4
UBA52P62987 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC12.57□□□□□ -0.4
UBA52P62987 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
UBA52P62987 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
UBA52P62987 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
UBA52P62987 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
UBA52P62987 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
UBA52P62987 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
UBA52P62987 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
UBA52P62987 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
UBA52P62987 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC12.57□□□□□ -0.4
UBA52P62987 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
UBA52P62987 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
UBA52P62987 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
UBA52P62987 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
UBA52P62987 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC12.56□□□□□ -0.4
UBA52P62987 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
UBA52P62987 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
UBA52P62987 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
UBA52P62987 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
UBA52P62987 FAM90A12P-201ENST00000519497 2375 ntBASIC12.56□□□□□ -0.4
UBA52P62987 FAM90A24P-201ENST00000520792 2369 ntBASIC12.56□□□□□ -0.4
UBA52P62987 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC12.56□□□□□ -0.4
UBA52P62987 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC12.56□□□□□ -0.4
UBA52P62987 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
UBA52P62987 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
UBA52P62987 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
UBA52P62987 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
UBA52P62987 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC12.56□□□□□ -0.4
UBA52P62987 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
UBA52P62987 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
UBA52P62987 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
UBA52P62987 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
UBA52P62987 MPV17-206ENST00000402722 827 ntTSL 3 BASIC12.56□□□□□ -0.4
UBA52P62987 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC12.56□□□□□ -0.4
UBA52P62987 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC12.56□□□□□ -0.4
UBA52P62987 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
UBA52P62987 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC12.56□□□□□ -0.4
UBA52P62987 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
UBA52P62987 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC12.56□□□□□ -0.4
UBA52P62987 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC12.56□□□□□ -0.4
UBA52P62987 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC12.56□□□□□ -0.4
UBA52P62987 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
UBA52P62987 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
UBA52P62987 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC12.56□□□□□ -0.4
UBA52P62987 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC12.56□□□□□ -0.4
UBA52P62987 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
UBA52P62987 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
UBA52P62987 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
UBA52P62987 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
UBA52P62987 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
UBA52P62987 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
UBA52P62987 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC12.56□□□□□ -0.4
UBA52P62987 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
UBA52P62987 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC12.56□□□□□ -0.4
UBA52P62987 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC12.56□□□□□ -0.4
UBA52P62987 CETP-203ENST00000566128 1733 ntTSL 5 BASIC12.56□□□□□ -0.4
UBA52P62987 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC12.56□□□□□ -0.4
UBA52P62987 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
UBA52P62987 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms