Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC13.18□□□□□ -0.3
CXCR4P61073 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CXCR4P61073 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC13.17□□□□□ -0.3
CXCR4P61073 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC13.17□□□□□ -0.3
CXCR4P61073 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CXCR4P61073 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CXCR4P61073 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CXCR4P61073 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CXCR4P61073 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CXCR4P61073 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CXCR4P61073 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
CXCR4P61073 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CXCR4P61073 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
CXCR4P61073 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CXCR4P61073 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CXCR4P61073 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC13.17□□□□□ -0.3
CXCR4P61073 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CXCR4P61073 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CXCR4P61073 SPDYE19P-201ENST00000338590 713 ntBASIC13.17□□□□□ -0.3
CXCR4P61073 RN7SKP230-201ENST00000365642 335 ntBASIC13.17□□□□□ -0.3
CXCR4P61073 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
CXCR4P61073 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CXCR4P61073 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC13.17□□□□□ -0.3
CXCR4P61073 C1QBPP1-201ENST00000400117 770 ntBASIC13.17□□□□□ -0.3
CXCR4P61073 ARSEP1-201ENST00000420443 635 ntBASIC13.17□□□□□ -0.3
CXCR4P61073 MEP1AP4-201ENST00000423244 1087 ntBASIC13.17□□□□□ -0.3
CXCR4P61073 AC055876.3-201ENST00000431496 288 ntBASIC13.17□□□□□ -0.3
CXCR4P61073 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CXCR4P61073 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC13.17□□□□□ -0.3
CXCR4P61073 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CXCR4P61073 ALG3P1-201ENST00000508806 1114 ntBASIC13.17□□□□□ -0.3
CXCR4P61073 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC13.17□□□□□ -0.3
CXCR4P61073 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC13.17□□□□□ -0.3
CXCR4P61073 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CXCR4P61073 AC027237.1-201ENST00000560942 655 ntBASIC13.17□□□□□ -0.3
CXCR4P61073 RRP7BP-205ENST00000566851 833 ntBASIC13.17□□□□□ -0.3
CXCR4P61073 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
CXCR4P61073 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC13.17□□□□□ -0.3
CXCR4P61073 AC138649.4-201ENST00000612222 287 ntBASIC13.17□□□□□ -0.3
CXCR4P61073 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC13.17□□□□□ -0.3
CXCR4P61073 CR392039.2-201ENST00000623182 509 ntBASIC13.17□□□□□ -0.3
CXCR4P61073 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC13.17□□□□□ -0.3
CXCR4P61073 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC13.17□□□□□ -0.3
CXCR4P61073 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
CXCR4P61073 LRRC59-203ENST00000576448 1531 ntBASIC13.17□□□□□ -0.3
CXCR4P61073 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC13.17□□□□□ -0.3
CXCR4P61073 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CXCR4P61073 KLC2-206ENST00000417856 3015 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CXCR4P61073 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CXCR4P61073 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CXCR4P61073 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CXCR4P61073 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CXCR4P61073 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CXCR4P61073 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CXCR4P61073 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CXCR4P61073 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CXCR4P61073 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CXCR4P61073 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC13.16□□□□□ -0.3
CXCR4P61073 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CXCR4P61073 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC13.16□□□□□ -0.3
CXCR4P61073 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.16□□□□□ -0.3
CXCR4P61073 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC13.16□□□□□ -0.3
CXCR4P61073 AC004623.1-201ENST00000624592 2127 ntBASIC13.16□□□□□ -0.3
CXCR4P61073 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC13.16□□□□□ -0.3
CXCR4P61073 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CXCR4P61073 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CXCR4P61073 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CXCR4P61073 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC13.16□□□□□ -0.3
CXCR4P61073 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
CXCR4P61073 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CXCR4P61073 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CXCR4P61073 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CXCR4P61073 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CXCR4P61073 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CXCR4P61073 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CXCR4P61073 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC13.16□□□□□ -0.3
CXCR4P61073 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CXCR4P61073 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CXCR4P61073 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
CXCR4P61073 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CXCR4P61073 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
CXCR4P61073 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CXCR4P61073 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CXCR4P61073 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC13.16□□□□□ -0.3
CXCR4P61073 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.16□□□□□ -0.3
CXCR4P61073 KLF2P2-201ENST00000416807 1039 ntBASIC13.16□□□□□ -0.3
CXCR4P61073 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC13.16□□□□□ -0.3
CXCR4P61073 EIF3FP3-201ENST00000434851 1086 ntBASIC13.16□□□□□ -0.3
CXCR4P61073 AL512638.1-201ENST00000457493 794 ntBASIC13.16□□□□□ -0.3
CXCR4P61073 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC13.16□□□□□ -0.3
CXCR4P61073 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CXCR4P61073 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC13.16□□□□□ -0.3
CXCR4P61073 AC104596.2-201ENST00000512793 793 ntBASIC13.16□□□□□ -0.3
CXCR4P61073 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC13.16□□□□□ -0.3
CXCR4P61073 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC13.16□□□□□ -0.3
CXCR4P61073 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CXCR4P61073 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC13.16□□□□□ -0.3
CXCR4P61073 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC13.16□□□□□ -0.3
CXCR4P61073 AP001160.2-201ENST00000596071 487 ntBASIC13.16□□□□□ -0.3
CXCR4P61073 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms