Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
SRP9P49458 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SRP9P49458 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SRP9P49458 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SRP9P49458 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
SRP9P49458 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
SRP9P49458 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SRP9P49458 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SRP9P49458 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC12.89□□□□□ -0.35
SRP9P49458 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC12.89□□□□□ -0.35
SRP9P49458 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SRP9P49458 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC12.89□□□□□ -0.35
SRP9P49458 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC12.89□□□□□ -0.35
SRP9P49458 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SRP9P49458 AL157414.3-201ENST00000624276 1954 ntBASIC12.89□□□□□ -0.35
SRP9P49458 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SRP9P49458 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
SRP9P49458 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SRP9P49458 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SRP9P49458 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SRP9P49458 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC12.89□□□□□ -0.35
SRP9P49458 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
SRP9P49458 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SRP9P49458 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
SRP9P49458 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC12.89□□□□□ -0.35
SRP9P49458 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC12.89□□□□□ -0.35
SRP9P49458 HLA-K-203ENST00000430151 1046 ntBASIC12.89□□□□□ -0.35
SRP9P49458 GSAP-205ENST00000430584 600 ntTSL 5 BASIC12.89□□□□□ -0.35
SRP9P49458 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC12.89□□□□□ -0.35
SRP9P49458 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC12.89□□□□□ -0.35
SRP9P49458 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC12.89□□□□□ -0.35
SRP9P49458 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC12.89□□□□□ -0.35
SRP9P49458 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC12.89□□□□□ -0.35
SRP9P49458 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC12.89□□□□□ -0.35
SRP9P49458 AP001889.1-201ENST00000525414 633 ntBASIC12.89□□□□□ -0.35
SRP9P49458 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SRP9P49458 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC12.89□□□□□ -0.35
SRP9P49458 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC12.89□□□□□ -0.35
SRP9P49458 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC12.89□□□□□ -0.35
SRP9P49458 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
SRP9P49458 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC12.89□□□□□ -0.35
SRP9P49458 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
SRP9P49458 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SRP9P49458 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SRP9P49458 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SRP9P49458 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
SRP9P49458 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
SRP9P49458 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SRP9P49458 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC12.89□□□□□ -0.35
SRP9P49458 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC12.89□□□□□ -0.35
SRP9P49458 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC12.89□□□□□ -0.35
SRP9P49458 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
SRP9P49458 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SRP9P49458 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SRP9P49458 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SRP9P49458 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
SRP9P49458 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC12.89□□□□□ -0.35
SRP9P49458 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SRP9P49458 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SRP9P49458 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC12.88□□□□□ -0.35
SRP9P49458 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SRP9P49458 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC12.88□□□□□ -0.35
SRP9P49458 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SRP9P49458 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
SRP9P49458 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SRP9P49458 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SRP9P49458 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SRP9P49458 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC12.88□□□□□ -0.35
SRP9P49458 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SRP9P49458 AC072061.1-201ENST00000569710 2234 ntBASIC12.88□□□□□ -0.35
SRP9P49458 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SRP9P49458 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SRP9P49458 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
SRP9P49458 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SRP9P49458 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SRP9P49458 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC12.88□□□□□ -0.35
SRP9P49458 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
SRP9P49458 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC12.88□□□□□ -0.35
SRP9P49458 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SRP9P49458 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SRP9P49458 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC12.88□□□□□ -0.35
SRP9P49458 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC12.88□□□□□ -0.35
SRP9P49458 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
SRP9P49458 BCRP2-202ENST00000447763 634 ntBASIC12.88□□□□□ -0.35
SRP9P49458 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC12.88□□□□□ -0.35
SRP9P49458 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
SRP9P49458 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC12.88□□□□□ -0.35
SRP9P49458 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC12.88□□□□□ -0.35
SRP9P49458 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
SRP9P49458 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
SRP9P49458 USP32P1-208ENST00000506594 1164 ntBASIC12.88□□□□□ -0.35
SRP9P49458 BCRP6-201ENST00000510112 632 ntBASIC12.88□□□□□ -0.35
SRP9P49458 BCRP7-201ENST00000511549 544 ntBASIC12.88□□□□□ -0.35
SRP9P49458 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
SRP9P49458 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC12.88□□□□□ -0.35
SRP9P49458 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
SRP9P49458 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC12.88□□□□□ -0.35
SRP9P49458 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SRP9P49458 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
SRP9P49458 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms