Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 AL080243.2-201ENST00000418783 582 ntBASIC12.29□□□□□ -0.44
VAMP1P23763 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC12.29□□□□□ -0.44
VAMP1P23763 AL355994.1-201ENST00000424379 260 ntBASIC12.29□□□□□ -0.44
VAMP1P23763 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC12.29□□□□□ -0.44
VAMP1P23763 AC007041.1-201ENST00000438989 1155 ntBASIC12.29□□□□□ -0.44
VAMP1P23763 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
VAMP1P23763 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
VAMP1P23763 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
VAMP1P23763 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
VAMP1P23763 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
VAMP1P23763 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
VAMP1P23763 AC004461.2-201ENST00000629517 803 ntBASIC12.29□□□□□ -0.44
VAMP1P23763 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC12.29□□□□□ -0.44
VAMP1P23763 SLC4A2-204ENST00000461735 4387 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
VAMP1P23763 CELF3-202ENST00000290585 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
VAMP1P23763 AC009093.1-201ENST00000566070 2099 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
VAMP1P23763 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC12.29□□□□□ -0.44
VAMP1P23763 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
VAMP1P23763 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC12.29□□□□□ -0.44
VAMP1P23763 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
VAMP1P23763 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC12.29□□□□□ -0.44
VAMP1P23763 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
VAMP1P23763 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC12.29□□□□□ -0.44
VAMP1P23763 AC093525.8-201ENST00000624099 1342 ntBASIC12.29□□□□□ -0.44
VAMP1P23763 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
VAMP1P23763 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
VAMP1P23763 GSTM3-201ENST00000256594 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
VAMP1P23763 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
VAMP1P23763 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
VAMP1P23763 AC131888.1-201ENST00000625028 2168 ntBASIC12.29□□□□□ -0.44
VAMP1P23763 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
VAMP1P23763 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC12.29□□□□□ -0.44
VAMP1P23763 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
VAMP1P23763 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
VAMP1P23763 AP002761.4-201ENST00000565433 3361 ntBASIC12.29□□□□□ -0.44
VAMP1P23763 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC12.29□□□□□ -0.44
VAMP1P23763 AL358933.1-201ENST00000565046 2830 ntBASIC12.29□□□□□ -0.44
VAMP1P23763 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
VAMP1P23763 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VAMP1P23763 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VAMP1P23763 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
VAMP1P23763 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC12.28□□□□□ -0.44
VAMP1P23763 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VAMP1P23763 MARCH3-201ENST00000308660 4196 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VAMP1P23763 ARHGAP45-210ENST00000590214 4191 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
VAMP1P23763 KIF21B-202ENST00000360529 5389 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
VAMP1P23763 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VAMP1P23763 HLCS-207ENST00000612277 6112 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
VAMP1P23763 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC12.28□□□□□ -0.44
VAMP1P23763 RFWD3-201ENST00000361070 4957 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VAMP1P23763 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC12.28□□□□□ -0.44
VAMP1P23763 CXCL5-201ENST00000296027 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VAMP1P23763 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC12.28□□□□□ -0.44
VAMP1P23763 FTO-214ENST00000636218 2227 ntTSL 5 BASIC12.28□□□□□ -0.44
VAMP1P23763 SLX4-201ENST00000294008 7307 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
VAMP1P23763 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VAMP1P23763 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
VAMP1P23763 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
VAMP1P23763 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VAMP1P23763 RBPMS2P1-201ENST00000437762 623 ntBASIC12.28□□□□□ -0.44
VAMP1P23763 CT45A11P-201ENST00000448043 1134 ntBASIC12.28□□□□□ -0.44
VAMP1P23763 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC12.28□□□□□ -0.44
VAMP1P23763 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC12.28□□□□□ -0.44
VAMP1P23763 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC12.28□□□□□ -0.44
VAMP1P23763 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VAMP1P23763 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC12.28□□□□□ -0.44
VAMP1P23763 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
VAMP1P23763 RPL18-209ENST00000550645 463 ntTSL 5 BASIC12.28□□□□□ -0.44
VAMP1P23763 RPL18-214ENST00000552588 559 ntTSL 3 BASIC12.28□□□□□ -0.44
VAMP1P23763 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC12.28□□□□□ -0.44
VAMP1P23763 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC12.28□□□□□ -0.44
VAMP1P23763 AC140113.2-201ENST00000604370 208 ntBASIC12.28□□□□□ -0.44
VAMP1P23763 AC027601.4-201ENST00000611259 610 ntBASIC12.28□□□□□ -0.44
VAMP1P23763 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
VAMP1P23763 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC12.28□□□□□ -0.44
VAMP1P23763 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
VAMP1P23763 CAND2-206ENST00000626378 333 ntTSL 5 BASIC12.28□□□□□ -0.44
VAMP1P23763 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
VAMP1P23763 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC12.28□□□□□ -0.44
VAMP1P23763 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VAMP1P23763 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
VAMP1P23763 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
VAMP1P23763 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC12.28□□□□□ -0.44
VAMP1P23763 KRT8P35-201ENST00000483942 1338 ntBASIC12.28□□□□□ -0.44
VAMP1P23763 TUBB8P4-201ENST00000511806 1324 ntBASIC12.28□□□□□ -0.44
VAMP1P23763 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VAMP1P23763 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
VAMP1P23763 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
VAMP1P23763 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
VAMP1P23763 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
VAMP1P23763 CYB5RL-201ENST00000287899 5777 ntTSL 3 BASIC12.28□□□□□ -0.44
VAMP1P23763 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
VAMP1P23763 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
VAMP1P23763 AC022497.1-201ENST00000624916 3691 ntBASIC12.27□□□□□ -0.44
VAMP1P23763 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
VAMP1P23763 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC12.27□□□□□ -0.44
VAMP1P23763 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC12.27□□□□□ -0.44
VAMP1P23763 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
VAMP1P23763 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC12.27□□□□□ -0.44
VAMP1P23763 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms