Protein–RNA interactions for Protein: P20020

ATP2B1, Plasma membrane calcium-transporting ATPase 1, humanhuman

Predictions only

Length 1,258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1P20020 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP2B1P20020 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP2B1P20020 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP2B1P20020 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC16.7■□□□□ 0.26
ATP2B1P20020 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP2B1P20020 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP2B1P20020 HARS-202ENST00000415192 1401 ntTSL 2 BASIC16.7■□□□□ 0.26
ATP2B1P20020 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC16.7■□□□□ 0.26
ATP2B1P20020 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP2B1P20020 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATP2B1P20020 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC16.69■□□□□ 0.26
ATP2B1P20020 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATP2B1P20020 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
ATP2B1P20020 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATP2B1P20020 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC16.69■□□□□ 0.26
ATP2B1P20020 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ATP2B1P20020 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC16.69■□□□□ 0.26
ATP2B1P20020 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC16.69■□□□□ 0.26
ATP2B1P20020 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
ATP2B1P20020 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC16.69■□□□□ 0.26
ATP2B1P20020 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC16.69■□□□□ 0.26
ATP2B1P20020 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATP2B1P20020 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
ATP2B1P20020 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATP2B1P20020 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATP2B1P20020 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC16.69■□□□□ 0.26
ATP2B1P20020 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC16.69■□□□□ 0.26
ATP2B1P20020 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ATP2B1P20020 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
ATP2B1P20020 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATP2B1P20020 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATP2B1P20020 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
ATP2B1P20020 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ATP2B1P20020 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
ATP2B1P20020 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC16.69■□□□□ 0.26
ATP2B1P20020 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC16.69■□□□□ 0.26
ATP2B1P20020 KLF2P1-201ENST00000447438 1042 ntBASIC16.69■□□□□ 0.26
ATP2B1P20020 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ATP2B1P20020 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ATP2B1P20020 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC16.69■□□□□ 0.26
ATP2B1P20020 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ATP2B1P20020 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC16.69■□□□□ 0.26
ATP2B1P20020 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC16.69■□□□□ 0.26
ATP2B1P20020 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
ATP2B1P20020 DUX4L46-201ENST00000566845 751 ntBASIC16.69■□□□□ 0.26
ATP2B1P20020 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC16.69■□□□□ 0.26
ATP2B1P20020 MIR4783-201ENST00000580343 82 ntBASIC16.69■□□□□ 0.26
ATP2B1P20020 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ATP2B1P20020 CYGB-203ENST00000589145 788 ntTSL 3 BASIC16.69■□□□□ 0.26
ATP2B1P20020 AC008825.2-201ENST00000603374 718 ntBASIC16.69■□□□□ 0.26
ATP2B1P20020 Six3os1_5.1-201ENST00000611000 271 ntBASIC16.69■□□□□ 0.26
ATP2B1P20020 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC16.69■□□□□ 0.26
ATP2B1P20020 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ATP2B1P20020 FAS-202ENST00000352159 1722 ntTSL 5 BASIC16.69■□□□□ 0.26
ATP2B1P20020 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATP2B1P20020 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATP2B1P20020 DKFZP434A062-201ENST00000573103 5021 ntBASIC16.69■□□□□ 0.26
ATP2B1P20020 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC16.69■□□□□ 0.26
ATP2B1P20020 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ATP2B1P20020 AC009093.10-201ENST00000641956 1442 ntBASIC16.69■□□□□ 0.26
ATP2B1P20020 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATP2B1P20020 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATP2B1P20020 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATP2B1P20020 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATP2B1P20020 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ATP2B1P20020 AC244394.1-201ENST00000435000 1665 ntBASIC16.69■□□□□ 0.26
ATP2B1P20020 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC16.69■□□□□ 0.26
ATP2B1P20020 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATP2B1P20020 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ATP2B1P20020 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ATP2B1P20020 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ATP2B1P20020 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATP2B1P20020 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATP2B1P20020 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC16.68■□□□□ 0.26
ATP2B1P20020 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATP2B1P20020 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATP2B1P20020 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
ATP2B1P20020 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC16.68■□□□□ 0.26
ATP2B1P20020 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATP2B1P20020 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATP2B1P20020 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ATP2B1P20020 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATP2B1P20020 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATP2B1P20020 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATP2B1P20020 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATP2B1P20020 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ATP2B1P20020 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATP2B1P20020 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
ATP2B1P20020 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC16.68■□□□□ 0.26
ATP2B1P20020 IGHVIII-5-2-201ENST00000522505 261 ntBASIC16.68■□□□□ 0.26
ATP2B1P20020 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
ATP2B1P20020 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC16.68■□□□□ 0.26
ATP2B1P20020 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC16.68■□□□□ 0.26
ATP2B1P20020 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC16.68■□□□□ 0.26
ATP2B1P20020 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC16.68■□□□□ 0.26
ATP2B1P20020 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC16.68■□□□□ 0.26
ATP2B1P20020 TMBIM7P-202ENST00000641474 1516 ntBASIC16.68■□□□□ 0.26
ATP2B1P20020 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ATP2B1P20020 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATP2B1P20020 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms