Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
FREM3P0C091 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC13.07□□□□□ -0.32
FREM3P0C091 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
FREM3P0C091 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC13.07□□□□□ -0.32
FREM3P0C091 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC13.07□□□□□ -0.32
FREM3P0C091 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC13.07□□□□□ -0.32
FREM3P0C091 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC13.07□□□□□ -0.32
FREM3P0C091 SCARNA12-201ENST00000459155 270 ntBASIC13.07□□□□□ -0.32
FREM3P0C091 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
FREM3P0C091 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC13.07□□□□□ -0.32
FREM3P0C091 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
FREM3P0C091 AC021016.3-201ENST00000608367 477 ntBASIC13.07□□□□□ -0.32
FREM3P0C091 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC13.07□□□□□ -0.32
FREM3P0C091 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
FREM3P0C091 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
FREM3P0C091 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
FREM3P0C091 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
FREM3P0C091 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
FREM3P0C091 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
FREM3P0C091 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC13.07□□□□□ -0.32
FREM3P0C091 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC13.07□□□□□ -0.32
FREM3P0C091 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
FREM3P0C091 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
FREM3P0C091 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
FREM3P0C091 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
FREM3P0C091 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
FREM3P0C091 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC13.06□□□□□ -0.32
FREM3P0C091 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
FREM3P0C091 AL591122.2-201ENST00000624125 1853 ntBASIC13.06□□□□□ -0.32
FREM3P0C091 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
FREM3P0C091 AC011498.7-201ENST00000624986 2027 ntBASIC13.06□□□□□ -0.32
FREM3P0C091 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
FREM3P0C091 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
FREM3P0C091 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
FREM3P0C091 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
FREM3P0C091 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC13.06□□□□□ -0.32
FREM3P0C091 AC073869.2-201ENST00000417338 1026 ntBASIC13.06□□□□□ -0.32
FREM3P0C091 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC13.06□□□□□ -0.32
FREM3P0C091 HLA-DPB2-205ENST00000435074 1188 ntBASIC13.06□□□□□ -0.32
FREM3P0C091 RPS2P36-201ENST00000456516 831 ntBASIC13.06□□□□□ -0.32
FREM3P0C091 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC13.06□□□□□ -0.32
FREM3P0C091 RNA5SP423-201ENST00000517127 109 ntBASIC13.06□□□□□ -0.32
FREM3P0C091 ALG1L13P-202ENST00000519320 584 ntBASIC13.06□□□□□ -0.32
FREM3P0C091 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
FREM3P0C091 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC13.06□□□□□ -0.32
FREM3P0C091 AC003686.1-201ENST00000550956 1034 ntBASIC13.06□□□□□ -0.32
FREM3P0C091 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
FREM3P0C091 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
FREM3P0C091 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC13.06□□□□□ -0.32
FREM3P0C091 AC140658.4-201ENST00000561990 352 ntBASIC13.06□□□□□ -0.32
FREM3P0C091 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC13.06□□□□□ -0.32
FREM3P0C091 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
FREM3P0C091 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
FREM3P0C091 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC13.06□□□□□ -0.32
FREM3P0C091 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
FREM3P0C091 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
FREM3P0C091 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC13.06□□□□□ -0.32
FREM3P0C091 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
FREM3P0C091 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
FREM3P0C091 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
FREM3P0C091 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
FREM3P0C091 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
FREM3P0C091 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
FREM3P0C091 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13.06□□□□□ -0.32
FREM3P0C091 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.06□□□□□ -0.32
FREM3P0C091 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
FREM3P0C091 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
FREM3P0C091 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
FREM3P0C091 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
FREM3P0C091 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
FREM3P0C091 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
FREM3P0C091 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
FREM3P0C091 RPS9P1-201ENST00000419943 583 ntBASIC13.06□□□□□ -0.32
FREM3P0C091 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
FREM3P0C091 Z97180.1-201ENST00000445173 988 ntBASIC13.06□□□□□ -0.32
FREM3P0C091 FTH1P22-201ENST00000456305 520 ntBASIC13.06□□□□□ -0.32
FREM3P0C091 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
FREM3P0C091 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC13.06□□□□□ -0.32
FREM3P0C091 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC13.06□□□□□ -0.32
FREM3P0C091 IMP3P2-201ENST00000489760 475 ntBASIC13.06□□□□□ -0.32
FREM3P0C091 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC13.06□□□□□ -0.32
FREM3P0C091 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.06□□□□□ -0.32
FREM3P0C091 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC13.06□□□□□ -0.32
FREM3P0C091 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC13.06□□□□□ -0.32
FREM3P0C091 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC13.06□□□□□ -0.32
FREM3P0C091 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC13.06□□□□□ -0.32
FREM3P0C091 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC13.06□□□□□ -0.32
FREM3P0C091 TP53-221ENST00000615910 1149 ntTSL 5 BASIC13.06□□□□□ -0.32
FREM3P0C091 AC090386.2-201ENST00000623010 1039 ntBASIC13.06□□□□□ -0.32
FREM3P0C091 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.05□□□□□ -0.32
FREM3P0C091 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC13.05□□□□□ -0.32
FREM3P0C091 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
FREM3P0C091 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
FREM3P0C091 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
FREM3P0C091 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
FREM3P0C091 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
FREM3P0C091 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC13.05□□□□□ -0.32
FREM3P0C091 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
FREM3P0C091 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
FREM3P0C091 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms