Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TPM3P06753 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TPM3P06753 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TPM3P06753 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC16.25■□□□□ 0.19
TPM3P06753 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TPM3P06753 AC134915.1-201ENST00000426461 574 ntBASIC16.25■□□□□ 0.19
TPM3P06753 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TPM3P06753 FAM86GP-201ENST00000448322 971 ntBASIC16.25■□□□□ 0.19
TPM3P06753 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.25■□□□□ 0.19
TPM3P06753 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC16.25■□□□□ 0.19
TPM3P06753 AP001582.1-201ENST00000525856 295 ntBASIC16.25■□□□□ 0.19
TPM3P06753 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC16.25■□□□□ 0.19
TPM3P06753 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TPM3P06753 RRP7BP-205ENST00000566851 833 ntBASIC16.25■□□□□ 0.19
TPM3P06753 AC120045.2-201ENST00000567334 178 ntBASIC16.25■□□□□ 0.19
TPM3P06753 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.25■□□□□ 0.19
TPM3P06753 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.25■□□□□ 0.19
TPM3P06753 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC16.25■□□□□ 0.19
TPM3P06753 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TPM3P06753 AC131902.2-201ENST00000566892 2172 ntBASIC16.25■□□□□ 0.19
TPM3P06753 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TPM3P06753 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TPM3P06753 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TPM3P06753 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TPM3P06753 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC16.25■□□□□ 0.19
TPM3P06753 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TPM3P06753 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TPM3P06753 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
TPM3P06753 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TPM3P06753 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TPM3P06753 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TPM3P06753 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TPM3P06753 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC16.24■□□□□ 0.19
TPM3P06753 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TPM3P06753 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
TPM3P06753 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
TPM3P06753 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TPM3P06753 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TPM3P06753 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TPM3P06753 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TPM3P06753 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TPM3P06753 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
TPM3P06753 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TPM3P06753 KLF2P2-201ENST00000416807 1039 ntBASIC16.24■□□□□ 0.19
TPM3P06753 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TPM3P06753 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.24■□□□□ 0.19
TPM3P06753 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC16.24■□□□□ 0.19
TPM3P06753 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC16.24■□□□□ 0.19
TPM3P06753 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
TPM3P06753 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.24■□□□□ 0.19
TPM3P06753 IGHV3-42-201ENST00000520410 361 ntBASIC16.24■□□□□ 0.19
TPM3P06753 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC16.24■□□□□ 0.19
TPM3P06753 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.24■□□□□ 0.19
TPM3P06753 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TPM3P06753 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC16.24■□□□□ 0.19
TPM3P06753 SPDYE22P-201ENST00000582158 798 ntBASIC16.24■□□□□ 0.19
TPM3P06753 BRI3BPP1-201ENST00000594224 787 ntBASIC16.24■□□□□ 0.19
TPM3P06753 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.24■□□□□ 0.19
TPM3P06753 AL390955.2-201ENST00000603032 514 ntBASIC16.24■□□□□ 0.19
TPM3P06753 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
TPM3P06753 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
TPM3P06753 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC16.24■□□□□ 0.19
TPM3P06753 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TPM3P06753 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
TPM3P06753 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TPM3P06753 AC010970.1-201ENST00000445125 1848 ntBASIC16.24■□□□□ 0.19
TPM3P06753 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
TPM3P06753 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
TPM3P06753 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TPM3P06753 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TPM3P06753 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TPM3P06753 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC16.23■□□□□ 0.19
TPM3P06753 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC16.23■□□□□ 0.19
TPM3P06753 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.23■□□□□ 0.19
TPM3P06753 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC16.23■□□□□ 0.19
TPM3P06753 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
TPM3P06753 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TPM3P06753 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC16.23■□□□□ 0.19
TPM3P06753 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
TPM3P06753 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC16.23■□□□□ 0.19
TPM3P06753 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TPM3P06753 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
TPM3P06753 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
TPM3P06753 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
TPM3P06753 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC16.23■□□□□ 0.19
TPM3P06753 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
TPM3P06753 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC16.23■□□□□ 0.19
TPM3P06753 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
TPM3P06753 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
TPM3P06753 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TPM3P06753 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC16.23■□□□□ 0.19
TPM3P06753 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.23■□□□□ 0.19
TPM3P06753 TREML5P-201ENST00000421694 576 ntBASIC16.23■□□□□ 0.19
TPM3P06753 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.23■□□□□ 0.19
TPM3P06753 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TPM3P06753 GCOM2-201ENST00000509133 1104 ntBASIC16.23■□□□□ 0.19
TPM3P06753 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.23■□□□□ 0.19
TPM3P06753 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.23■□□□□ 0.19
TPM3P06753 TPRX2P-201ENST00000535362 881 ntBASIC16.23■□□□□ 0.19
TPM3P06753 SORD2P-201ENST00000558556 1069 ntBASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms