Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
POLR3DP05423 AC015802.1-201ENST00000588104 1449 ntBASIC17.24■□□□□ 0.35
POLR3DP05423 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
POLR3DP05423 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
POLR3DP05423 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
POLR3DP05423 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
POLR3DP05423 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
POLR3DP05423 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
POLR3DP05423 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
POLR3DP05423 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
POLR3DP05423 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
POLR3DP05423 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC17.24■□□□□ 0.35
POLR3DP05423 EEF1DP6-201ENST00000449232 372 ntBASIC17.24■□□□□ 0.35
POLR3DP05423 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC17.24■□□□□ 0.35
POLR3DP05423 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
POLR3DP05423 AC008723.1-201ENST00000506922 207 ntBASIC17.24■□□□□ 0.35
POLR3DP05423 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC17.24■□□□□ 0.35
POLR3DP05423 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
POLR3DP05423 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC17.24■□□□□ 0.35
POLR3DP05423 MIR4754-201ENST00000582477 89 ntBASIC17.24■□□□□ 0.35
POLR3DP05423 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC17.24■□□□□ 0.35
POLR3DP05423 CDK7-214ENST00000626796 358 ntTSL 5 BASIC17.24■□□□□ 0.35
POLR3DP05423 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC17.24■□□□□ 0.35
POLR3DP05423 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
POLR3DP05423 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
POLR3DP05423 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
POLR3DP05423 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
POLR3DP05423 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
POLR3DP05423 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
POLR3DP05423 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
POLR3DP05423 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
POLR3DP05423 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC17.24■□□□□ 0.35
POLR3DP05423 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
POLR3DP05423 ST20-AS1-201ENST00000560255 4223 ntBASIC17.24■□□□□ 0.35
POLR3DP05423 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC17.24■□□□□ 0.35
POLR3DP05423 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC17.24■□□□□ 0.35
POLR3DP05423 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
POLR3DP05423 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
POLR3DP05423 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
POLR3DP05423 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
POLR3DP05423 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
POLR3DP05423 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
POLR3DP05423 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
POLR3DP05423 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
POLR3DP05423 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
POLR3DP05423 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
POLR3DP05423 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
POLR3DP05423 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC17.23■□□□□ 0.35
POLR3DP05423 TBC1D3J-201ENST00000620719 1426 ntBASIC17.23■□□□□ 0.35
POLR3DP05423 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC17.23■□□□□ 0.35
POLR3DP05423 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
POLR3DP05423 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
POLR3DP05423 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
POLR3DP05423 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC17.23■□□□□ 0.35
POLR3DP05423 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
POLR3DP05423 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
POLR3DP05423 AC091046.1-201ENST00000331871 207 ntBASIC17.23■□□□□ 0.35
POLR3DP05423 AC092506.1-202ENST00000401022 528 ntBASIC17.23■□□□□ 0.35
POLR3DP05423 LBH-202ENST00000401506 485 ntTSL 3 BASIC17.23■□□□□ 0.35
POLR3DP05423 PARVG-202ENST00000415224 999 ntTSL 2 BASIC17.23■□□□□ 0.35
POLR3DP05423 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC17.23■□□□□ 0.35
POLR3DP05423 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC17.23■□□□□ 0.35
POLR3DP05423 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
POLR3DP05423 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
POLR3DP05423 SORD2P-201ENST00000558556 1069 ntBASIC17.23■□□□□ 0.35
POLR3DP05423 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC17.23■□□□□ 0.35
POLR3DP05423 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC17.23■□□□□ 0.35
POLR3DP05423 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC17.23■□□□□ 0.35
POLR3DP05423 AL109837.1-201ENST00000603272 613 ntBASIC17.23■□□□□ 0.35
POLR3DP05423 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC17.23■□□□□ 0.35
POLR3DP05423 AC006453.1-201ENST00000636037 1257 ntBASIC17.23■□□□□ 0.35
POLR3DP05423 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
POLR3DP05423 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC17.23■□□□□ 0.35
POLR3DP05423 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC17.23■□□□□ 0.35
POLR3DP05423 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
POLR3DP05423 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
POLR3DP05423 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
POLR3DP05423 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
POLR3DP05423 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
POLR3DP05423 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
POLR3DP05423 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC17.22■□□□□ 0.35
POLR3DP05423 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
POLR3DP05423 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
POLR3DP05423 AC215219.1-201ENST00000400706 1817 ntBASIC17.22■□□□□ 0.35
POLR3DP05423 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC17.22■□□□□ 0.35
POLR3DP05423 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
POLR3DP05423 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
POLR3DP05423 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
POLR3DP05423 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
POLR3DP05423 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
POLR3DP05423 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
POLR3DP05423 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
POLR3DP05423 RNA5SP359-201ENST00000364838 113 ntBASIC17.22■□□□□ 0.35
POLR3DP05423 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC17.22■□□□□ 0.35
POLR3DP05423 AC022447.6-201ENST00000515522 438 ntBASIC17.22■□□□□ 0.35
POLR3DP05423 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC17.22■□□□□ 0.35
POLR3DP05423 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
POLR3DP05423 AC005586.2-201ENST00000563946 837 ntBASIC17.22■□□□□ 0.35
POLR3DP05423 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
POLR3DP05423 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms