Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC13.14□□□□□ -0.31
HMGN1P05114 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC13.14□□□□□ -0.31
HMGN1P05114 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
HMGN1P05114 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC13.13□□□□□ -0.31
HMGN1P05114 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
HMGN1P05114 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HMGN1P05114 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HMGN1P05114 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HMGN1P05114 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HMGN1P05114 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HMGN1P05114 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HMGN1P05114 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
HMGN1P05114 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HMGN1P05114 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HMGN1P05114 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HMGN1P05114 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HMGN1P05114 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
HMGN1P05114 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HMGN1P05114 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HMGN1P05114 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
HMGN1P05114 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
HMGN1P05114 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HMGN1P05114 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC13.13□□□□□ -0.31
HMGN1P05114 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
HMGN1P05114 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
HMGN1P05114 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC13.13□□□□□ -0.31
HMGN1P05114 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC13.13□□□□□ -0.31
HMGN1P05114 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HMGN1P05114 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC13.13□□□□□ -0.31
HMGN1P05114 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
HMGN1P05114 RN7SKP175-201ENST00000408472 289 ntBASIC13.13□□□□□ -0.31
HMGN1P05114 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HMGN1P05114 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC13.13□□□□□ -0.31
HMGN1P05114 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC13.13□□□□□ -0.31
HMGN1P05114 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC13.13□□□□□ -0.31
HMGN1P05114 AL035414.1-201ENST00000451327 857 ntBASIC13.13□□□□□ -0.31
HMGN1P05114 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC13.13□□□□□ -0.31
HMGN1P05114 CDC23-208ENST00000505120 455 ntTSL 3 BASIC13.13□□□□□ -0.31
HMGN1P05114 RNA5SP421-201ENST00000516864 134 ntBASIC13.13□□□□□ -0.31
HMGN1P05114 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC13.13□□□□□ -0.31
HMGN1P05114 NEU3-203ENST00000529024 581 ntTSL 3 BASIC13.13□□□□□ -0.31
HMGN1P05114 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC13.13□□□□□ -0.31
HMGN1P05114 DUT-210ENST00000559935 569 ntTSL 3 BASIC13.13□□□□□ -0.31
HMGN1P05114 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC13.13□□□□□ -0.31
HMGN1P05114 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC13.13□□□□□ -0.31
HMGN1P05114 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC13.13□□□□□ -0.31
HMGN1P05114 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC13.13□□□□□ -0.31
HMGN1P05114 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HMGN1P05114 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
HMGN1P05114 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
HMGN1P05114 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HMGN1P05114 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC13.13□□□□□ -0.31
HMGN1P05114 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HMGN1P05114 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
HMGN1P05114 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HMGN1P05114 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
HMGN1P05114 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HMGN1P05114 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HMGN1P05114 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HMGN1P05114 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HMGN1P05114 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC13.13□□□□□ -0.31
HMGN1P05114 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
HMGN1P05114 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
HMGN1P05114 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HMGN1P05114 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HMGN1P05114 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HMGN1P05114 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HMGN1P05114 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HMGN1P05114 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
HMGN1P05114 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HMGN1P05114 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC13.13□□□□□ -0.31
HMGN1P05114 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
HMGN1P05114 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC13.13□□□□□ -0.31
HMGN1P05114 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HMGN1P05114 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HMGN1P05114 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC13.13□□□□□ -0.31
HMGN1P05114 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
HMGN1P05114 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC13.12□□□□□ -0.31
HMGN1P05114 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC13.12□□□□□ -0.31
HMGN1P05114 AC068760.1-201ENST00000493579 1953 ntBASIC13.12□□□□□ -0.31
HMGN1P05114 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC13.12□□□□□ -0.31
HMGN1P05114 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
HMGN1P05114 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
HMGN1P05114 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
HMGN1P05114 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC13.12□□□□□ -0.31
HMGN1P05114 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
HMGN1P05114 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HMGN1P05114 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC13.12□□□□□ -0.31
HMGN1P05114 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
HMGN1P05114 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC13.12□□□□□ -0.31
HMGN1P05114 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
HMGN1P05114 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HMGN1P05114 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
HMGN1P05114 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HMGN1P05114 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
HMGN1P05114 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC13.12□□□□□ -0.31
HMGN1P05114 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HMGN1P05114 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
HMGN1P05114 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
HMGN1P05114 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms