Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TIMP1P01033 FAM226B-201ENST00000602508 1490 ntBASIC15.26■□□□□ 0.03
TIMP1P01033 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC15.26■□□□□ 0.03
TIMP1P01033 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TIMP1P01033 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TIMP1P01033 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TIMP1P01033 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
TIMP1P01033 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TIMP1P01033 SUCLA2-205ENST00000470760 1445 ntTSL 2 BASIC15.26■□□□□ 0.03
TIMP1P01033 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TIMP1P01033 SALL4P6-201ENST00000429385 1691 ntBASIC15.25■□□□□ 0.03
TIMP1P01033 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC15.25■□□□□ 0.03
TIMP1P01033 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TIMP1P01033 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TIMP1P01033 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TIMP1P01033 DAO-208ENST00000551281 1345 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TIMP1P01033 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.25■□□□□ 0.03
TIMP1P01033 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC15.25■□□□□ 0.03
TIMP1P01033 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TIMP1P01033 ATP5H-202ENST00000344546 553 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TIMP1P01033 HLA-DMA-202ENST00000395303 1007 ntBASIC15.25■□□□□ 0.03
TIMP1P01033 TOMM5-203ENST00000401811 789 ntTSL 2 BASIC15.25■□□□□ 0.03
TIMP1P01033 MIR1307-201ENST00000408840 149 ntBASIC15.25■□□□□ 0.03
TIMP1P01033 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC15.25■□□□□ 0.03
TIMP1P01033 AC133141.1-201ENST00000443015 339 ntBASIC15.25■□□□□ 0.03
TIMP1P01033 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC15.25■□□□□ 0.03
TIMP1P01033 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TIMP1P01033 Z82249.1-201ENST00000453866 568 ntTSL 4 BASIC15.25■□□□□ 0.03
TIMP1P01033 KRT18P15-201ENST00000458108 1291 ntBASIC15.25■□□□□ 0.03
TIMP1P01033 TMEM222-203ENST00000464813 1071 ntTSL 2 BASIC15.25■□□□□ 0.03
TIMP1P01033 GLUD1P3-201ENST00000507952 896 ntTSL 2 BASIC15.25■□□□□ 0.03
TIMP1P01033 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TIMP1P01033 FXYD6-208ENST00000529335 708 ntTSL 3 BASIC15.25■□□□□ 0.03
TIMP1P01033 SPAG5-AS1-204ENST00000556050 871 ntTSL 2 BASIC15.25■□□□□ 0.03
TIMP1P01033 AL357143.1-203ENST00000639750 881 ntBASIC15.25■□□□□ 0.03
TIMP1P01033 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TIMP1P01033 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TIMP1P01033 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
TIMP1P01033 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.25■□□□□ 0.03
TIMP1P01033 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TIMP1P01033 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TIMP1P01033 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC15.25■□□□□ 0.03
TIMP1P01033 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TIMP1P01033 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TIMP1P01033 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC15.25■□□□□ 0.03
TIMP1P01033 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.25■□□□□ 0.03
TIMP1P01033 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TIMP1P01033 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC15.25■□□□□ 0.03
TIMP1P01033 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TIMP1P01033 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TIMP1P01033 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
TIMP1P01033 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
TIMP1P01033 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TIMP1P01033 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TIMP1P01033 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC15.24■□□□□ 0.03
TIMP1P01033 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.24■□□□□ 0.03
TIMP1P01033 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TIMP1P01033 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TIMP1P01033 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TIMP1P01033 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
TIMP1P01033 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TIMP1P01033 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
TIMP1P01033 GH1-203ENST00000351388 685 ntTSL 2 BASIC15.24■□□□□ 0.03
TIMP1P01033 NCR1-204ENST00000357397 594 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TIMP1P01033 VASH2-205ENST00000366967 1206 ntTSL 2 BASIC15.24■□□□□ 0.03
TIMP1P01033 SPATA21-202ENST00000375577 1136 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TIMP1P01033 NQO2-204ENST00000380454 851 ntTSL 2 BASIC15.24■□□□□ 0.03
TIMP1P01033 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC15.24■□□□□ 0.03
TIMP1P01033 EEF1DP2-201ENST00000433698 843 ntBASIC15.24■□□□□ 0.03
TIMP1P01033 AL773545.2-201ENST00000442149 472 ntBASIC15.24■□□□□ 0.03
TIMP1P01033 GULOP-201ENST00000454030 748 ntBASIC15.24■□□□□ 0.03
TIMP1P01033 PEBP1P3-201ENST00000455475 548 ntBASIC15.24■□□□□ 0.03
TIMP1P01033 AC012593.1-214ENST00000586952 767 ntTSL 5 BASIC15.24■□□□□ 0.03
TIMP1P01033 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TIMP1P01033 HAMP-203ENST00000598398 652 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
TIMP1P01033 AC010531.8-201ENST00000623341 685 ntBASIC15.24■□□□□ 0.03
TIMP1P01033 AL592295.3-201ENST00000637155 863 ntTSL 5 BASIC15.24■□□□□ 0.03
TIMP1P01033 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TIMP1P01033 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC15.24■□□□□ 0.03
TIMP1P01033 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TIMP1P01033 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TIMP1P01033 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TIMP1P01033 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TIMP1P01033 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
TIMP1P01033 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.24■□□□□ 0.03
TIMP1P01033 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TIMP1P01033 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TIMP1P01033 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TIMP1P01033 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.23■□□□□ 0.03
TIMP1P01033 AC018529.2-202ENST00000611482 3087 ntBASIC15.23■□□□□ 0.03
TIMP1P01033 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.23■□□□□ 0.03
TIMP1P01033 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
TIMP1P01033 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TIMP1P01033 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TIMP1P01033 U3.5-201ENST00000363448 216 ntBASIC15.23■□□□□ 0.03
TIMP1P01033 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TIMP1P01033 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TIMP1P01033 Z95624.1-201ENST00000413528 628 ntTSL 5 BASIC15.23■□□□□ 0.03
TIMP1P01033 AHCYP3-201ENST00000420053 1279 ntBASIC15.23■□□□□ 0.03
TIMP1P01033 AC103563.1-201ENST00000429316 123 ntBASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms