Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
SIX3O95343 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
SIX3O95343 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC14.13□□□□□ -0.15
SIX3O95343 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SIX3O95343 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
SIX3O95343 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC14.13□□□□□ -0.15
SIX3O95343 CICP8-201ENST00000455800 2813 ntBASIC14.13□□□□□ -0.15
SIX3O95343 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SIX3O95343 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
SIX3O95343 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC14.13□□□□□ -0.15
SIX3O95343 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SIX3O95343 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SIX3O95343 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SIX3O95343 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
SIX3O95343 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC14.13□□□□□ -0.15
SIX3O95343 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
SIX3O95343 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SIX3O95343 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
SIX3O95343 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SIX3O95343 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SIX3O95343 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
SIX3O95343 AC073548.1-201ENST00000624088 1882 ntBASIC14.12□□□□□ -0.15
SIX3O95343 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SIX3O95343 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SIX3O95343 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC14.12□□□□□ -0.15
SIX3O95343 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SIX3O95343 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SIX3O95343 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC14.12□□□□□ -0.15
SIX3O95343 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SIX3O95343 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC14.12□□□□□ -0.15
SIX3O95343 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SIX3O95343 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SIX3O95343 EDF1-203ENST00000371649 790 ntTSL 2 BASIC14.12□□□□□ -0.15
SIX3O95343 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC14.12□□□□□ -0.15
SIX3O95343 AC112492.5-201ENST00000421897 457 ntBASIC14.12□□□□□ -0.15
SIX3O95343 USB1-202ENST00000423271 1217 ntTSL 2 BASIC14.12□□□□□ -0.15
SIX3O95343 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC14.12□□□□□ -0.15
SIX3O95343 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
SIX3O95343 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC14.12□□□□□ -0.15
SIX3O95343 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC14.12□□□□□ -0.15
SIX3O95343 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SIX3O95343 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
SIX3O95343 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC14.12□□□□□ -0.15
SIX3O95343 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC14.12□□□□□ -0.15
SIX3O95343 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC14.12□□□□□ -0.15
SIX3O95343 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC14.12□□□□□ -0.15
SIX3O95343 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
SIX3O95343 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SIX3O95343 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SIX3O95343 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
SIX3O95343 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
SIX3O95343 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC14.12□□□□□ -0.15
SIX3O95343 AL137784.3-201ENST00000623858 2288 ntBASIC14.12□□□□□ -0.15
SIX3O95343 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC14.12□□□□□ -0.15
SIX3O95343 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC14.12□□□□□ -0.15
SIX3O95343 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SIX3O95343 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC14.12□□□□□ -0.15
SIX3O95343 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
SIX3O95343 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SIX3O95343 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC14.12□□□□□ -0.15
SIX3O95343 AL008718.2-201ENST00000609206 1313 ntBASIC14.12□□□□□ -0.15
SIX3O95343 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SIX3O95343 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC14.12□□□□□ -0.15
SIX3O95343 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC14.12□□□□□ -0.15
SIX3O95343 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.12□□□□□ -0.15
SIX3O95343 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SIX3O95343 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SIX3O95343 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC14.11□□□□□ -0.15
SIX3O95343 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
SIX3O95343 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SIX3O95343 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SIX3O95343 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SIX3O95343 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC14.11□□□□□ -0.15
SIX3O95343 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SIX3O95343 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
SIX3O95343 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SIX3O95343 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
SIX3O95343 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SIX3O95343 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.11□□□□□ -0.15
SIX3O95343 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SIX3O95343 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SIX3O95343 AK6-201ENST00000380818 1183 ntTSL 2 BASIC14.11□□□□□ -0.15
SIX3O95343 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SIX3O95343 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC14.11□□□□□ -0.15
SIX3O95343 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC14.11□□□□□ -0.15
SIX3O95343 KRT43P-201ENST00000434019 910 ntBASIC14.11□□□□□ -0.15
SIX3O95343 AL645933.1-201ENST00000440087 609 ntBASIC14.11□□□□□ -0.15
SIX3O95343 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC14.11□□□□□ -0.15
SIX3O95343 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
SIX3O95343 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC14.11□□□□□ -0.15
SIX3O95343 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC14.11□□□□□ -0.15
SIX3O95343 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC14.11□□□□□ -0.15
SIX3O95343 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC14.11□□□□□ -0.15
SIX3O95343 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC14.11□□□□□ -0.15
SIX3O95343 MIR497HG-202ENST00000572453 3838 ntBASIC14.11□□□□□ -0.15
SIX3O95343 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC14.11□□□□□ -0.15
SIX3O95343 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC14.11□□□□□ -0.15
SIX3O95343 AC132192.2-201ENST00000596206 1147 ntBASIC14.11□□□□□ -0.15
SIX3O95343 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC14.11□□□□□ -0.15
SIX3O95343 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms