Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHD2O14647 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC19.21■□□□□ 0.67
CHD2O14647 SNRPN-205ENST00000400100 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHD2O14647 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC19.21■□□□□ 0.67
CHD2O14647 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC19.21■□□□□ 0.67
CHD2O14647 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHD2O14647 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHD2O14647 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CHD2O14647 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHD2O14647 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CHD2O14647 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC19.21■□□□□ 0.67
CHD2O14647 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC19.21■□□□□ 0.67
CHD2O14647 MAD2L1BP-201ENST00000372171 1301 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHD2O14647 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHD2O14647 AADACL4-201ENST00000376221 1575 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CHD2O14647 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHD2O14647 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC19.21■□□□□ 0.67
CHD2O14647 TNFRSF10A-204ENST00000613472 978 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CHD2O14647 AL137028.2-201ENST00000614601 256 ntBASIC19.21■□□□□ 0.67
CHD2O14647 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHD2O14647 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
CHD2O14647 CKAP2-202ENST00000378034 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHD2O14647 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC19.2■□□□□ 0.66
CHD2O14647 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHD2O14647 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC19.2■□□□□ 0.66
CHD2O14647 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHD2O14647 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHD2O14647 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC19.2■□□□□ 0.66
CHD2O14647 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHD2O14647 TUBB4AP1-201ENST00000450755 1325 ntBASIC19.2■□□□□ 0.66
CHD2O14647 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CHD2O14647 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHD2O14647 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHD2O14647 THAP4-203ENST00000402545 833 ntTSL 5 BASIC19.2■□□□□ 0.66
CHD2O14647 TXLNGY-202ENST00000407724 1000 ntTSL 3 BASIC19.2■□□□□ 0.66
CHD2O14647 AC090696.1-201ENST00000419100 418 ntTSL 3 BASIC19.2■□□□□ 0.66
CHD2O14647 AC078882.1-201ENST00000436132 416 ntTSL 2 BASIC19.2■□□□□ 0.66
CHD2O14647 MTHFD2P7-201ENST00000483867 983 ntBASIC19.2■□□□□ 0.66
CHD2O14647 AP003785.1-201ENST00000544959 492 ntTSL 4 BASIC19.2■□□□□ 0.66
CHD2O14647 C3orf84-203ENST00000545770 706 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
CHD2O14647 LINC00643-202ENST00000553426 526 ntTSL 3 BASIC19.2■□□□□ 0.66
CHD2O14647 NAT9-219ENST00000582524 573 ntTSL 4 BASIC19.2■□□□□ 0.66
CHD2O14647 OR5L1-201ENST00000625203 1110 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CHD2O14647 SNORA50D-202ENST00000627561 132 ntBASIC19.2■□□□□ 0.66
CHD2O14647 ADORA3-204ENST00000632535 1201 ntTSL 3 BASIC19.2■□□□□ 0.66
CHD2O14647 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC19.2■□□□□ 0.66
CHD2O14647 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHD2O14647 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHD2O14647 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CHD2O14647 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHD2O14647 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHD2O14647 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CHD2O14647 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CHD2O14647 TRIB1-203ENST00000520847 1332 ntTSL 2 BASIC19.19■□□□□ 0.66
CHD2O14647 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHD2O14647 MTHFR-210ENST00000641407 2387 ntBASIC19.19■□□□□ 0.66
CHD2O14647 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC19.19■□□□□ 0.66
CHD2O14647 BLVRA-201ENST00000265523 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHD2O14647 ZMAT5-201ENST00000344318 899 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHD2O14647 LINC00449-201ENST00000366259 872 ntTSL 2 BASIC19.19■□□□□ 0.66
CHD2O14647 AP000959.1-201ENST00000441759 977 ntTSL 3 BASIC19.19■□□□□ 0.66
CHD2O14647 RBM14-205ENST00000443702 732 ntTSL 3 BASIC19.19■□□□□ 0.66
CHD2O14647 NDUFA3-214ENST00000485876 963 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHD2O14647 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC19.19■□□□□ 0.66
CHD2O14647 AC140912.1-202ENST00000561802 194 ntTSL 3 BASIC19.19■□□□□ 0.66
CHD2O14647 AC079779.4-201ENST00000619113 548 ntTSL 5 BASIC19.19■□□□□ 0.66
CHD2O14647 AL499606.1-201ENST00000627866 413 ntTSL 3 BASIC19.19■□□□□ 0.66
CHD2O14647 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
CHD2O14647 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CHD2O14647 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHD2O14647 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHD2O14647 NAP1L1-226ENST00000552342 1526 ntTSL 5 BASIC19.19■□□□□ 0.66
CHD2O14647 RXRG-201ENST00000359842 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHD2O14647 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHD2O14647 CPA1-207ENST00000484324 1303 ntTSL 5 BASIC19.19■□□□□ 0.66
CHD2O14647 RCC2P1-201ENST00000452257 1476 ntBASIC19.19■□□□□ 0.66
CHD2O14647 FMO6P-201ENST00000236166 1620 ntBASIC19.19■□□□□ 0.66
CHD2O14647 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC19.19■□□□□ 0.66
CHD2O14647 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHD2O14647 ZNF485-202ENST00000374435 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHD2O14647 CFL1P6-201ENST00000400899 494 ntBASIC19.18■□□□□ 0.66
CHD2O14647 AL162151.1-201ENST00000423922 561 ntTSL 4 BASIC19.18■□□□□ 0.66
CHD2O14647 AC010997.2-201ENST00000427610 260 ntTSL 3 BASIC19.18■□□□□ 0.66
CHD2O14647 C3orf84-201ENST00000432035 669 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
CHD2O14647 AC104212.2-201ENST00000478813 628 ntBASIC19.18■□□□□ 0.66
CHD2O14647 HAND2-AS1-208ENST00000504740 837 ntTSL 3 BASIC19.18■□□□□ 0.66
CHD2O14647 AC103724.2-201ENST00000520355 476 ntBASIC19.18■□□□□ 0.66
CHD2O14647 ANAPC15-209ENST00000538919 849 ntAPPRIS P3 TSL 3 BASIC19.18■□□□□ 0.66
CHD2O14647 AC004584.1-201ENST00000572187 549 ntTSL 3 BASIC19.18■□□□□ 0.66
CHD2O14647 TARM1-202ENST00000616041 1218 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CHD2O14647 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHD2O14647 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CHD2O14647 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
CHD2O14647 ELP4-223ENST00000640342 1392 ntTSL 5 BASIC19.18■□□□□ 0.66
CHD2O14647 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CHD2O14647 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHD2O14647 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHD2O14647 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHD2O14647 AL591806.3-201ENST00000289779 2096 ntAPPRIS P5 TSL 2 BASIC19.18■□□□□ 0.66
CHD2O14647 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 166.6 ms