Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 MSRA-203ENST00000441698 788 ntTSL 2 BASIC17.15■□□□□ 0.34
CLIP2Q9UDT6 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC17.15■□□□□ 0.34
CLIP2Q9UDT6 UPF3AP2-201ENST00000457924 1132 ntBASIC17.15■□□□□ 0.34
CLIP2Q9UDT6 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
CLIP2Q9UDT6 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CLIP2Q9UDT6 AC084346.2-201ENST00000607097 949 ntBASIC17.15■□□□□ 0.34
CLIP2Q9UDT6 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLIP2Q9UDT6 NAP1L6-202ENST00000641404 1222 ntBASIC17.15■□□□□ 0.34
CLIP2Q9UDT6 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC17.15■□□□□ 0.34
CLIP2Q9UDT6 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC17.15■□□□□ 0.34
CLIP2Q9UDT6 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC17.15■□□□□ 0.34
CLIP2Q9UDT6 AC005252.3-201ENST00000623855 2258 ntBASIC17.15■□□□□ 0.34
CLIP2Q9UDT6 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC17.15■□□□□ 0.34
CLIP2Q9UDT6 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLIP2Q9UDT6 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLIP2Q9UDT6 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
CLIP2Q9UDT6 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CLIP2Q9UDT6 AC007326.2-201ENST00000624224 7579 ntBASIC17.14■□□□□ 0.34
CLIP2Q9UDT6 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC17.14■□□□□ 0.34
CLIP2Q9UDT6 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
CLIP2Q9UDT6 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.34
CLIP2Q9UDT6 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
CLIP2Q9UDT6 AC009093.10-201ENST00000641956 1442 ntBASIC17.14■□□□□ 0.33
CLIP2Q9UDT6 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLIP2Q9UDT6 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLIP2Q9UDT6 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLIP2Q9UDT6 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC17.14■□□□□ 0.33
CLIP2Q9UDT6 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLIP2Q9UDT6 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC17.14■□□□□ 0.33
CLIP2Q9UDT6 RAN-210ENST00000541630 1475 ntTSL 2 BASIC17.14■□□□□ 0.33
CLIP2Q9UDT6 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC17.14■□□□□ 0.33
CLIP2Q9UDT6 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLIP2Q9UDT6 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CLIP2Q9UDT6 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC17.14■□□□□ 0.33
CLIP2Q9UDT6 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC17.14■□□□□ 0.33
CLIP2Q9UDT6 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC17.14■□□□□ 0.33
CLIP2Q9UDT6 IMP3P2-201ENST00000489760 475 ntBASIC17.14■□□□□ 0.33
CLIP2Q9UDT6 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC17.14■□□□□ 0.33
CLIP2Q9UDT6 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC17.14■□□□□ 0.33
CLIP2Q9UDT6 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC17.14■□□□□ 0.33
CLIP2Q9UDT6 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC17.14■□□□□ 0.33
CLIP2Q9UDT6 ARL16-210ENST00000574938 751 ntTSL 2 BASIC17.14■□□□□ 0.33
CLIP2Q9UDT6 RN7SL574P-201ENST00000581512 297 ntBASIC17.14■□□□□ 0.33
CLIP2Q9UDT6 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CLIP2Q9UDT6 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CLIP2Q9UDT6 AC133540.1-201ENST00000620845 1019 ntBASIC17.14■□□□□ 0.33
CLIP2Q9UDT6 AC091812.3-201ENST00000621362 345 ntBASIC17.14■□□□□ 0.33
CLIP2Q9UDT6 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLIP2Q9UDT6 DDX5-235ENST00000630471 473 ntTSL 4 BASIC17.14■□□□□ 0.33
CLIP2Q9UDT6 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLIP2Q9UDT6 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLIP2Q9UDT6 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CLIP2Q9UDT6 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CLIP2Q9UDT6 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC17.14■□□□□ 0.33
CLIP2Q9UDT6 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLIP2Q9UDT6 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLIP2Q9UDT6 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLIP2Q9UDT6 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLIP2Q9UDT6 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC17.14■□□□□ 0.33
CLIP2Q9UDT6 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLIP2Q9UDT6 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
CLIP2Q9UDT6 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC17.14■□□□□ 0.33
CLIP2Q9UDT6 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLIP2Q9UDT6 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CLIP2Q9UDT6 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLIP2Q9UDT6 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLIP2Q9UDT6 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CLIP2Q9UDT6 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLIP2Q9UDT6 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC17.13■□□□□ 0.33
CLIP2Q9UDT6 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CLIP2Q9UDT6 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLIP2Q9UDT6 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CLIP2Q9UDT6 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLIP2Q9UDT6 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLIP2Q9UDT6 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLIP2Q9UDT6 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CLIP2Q9UDT6 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLIP2Q9UDT6 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CLIP2Q9UDT6 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CLIP2Q9UDT6 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC17.13■□□□□ 0.33
CLIP2Q9UDT6 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLIP2Q9UDT6 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CLIP2Q9UDT6 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLIP2Q9UDT6 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC17.13■□□□□ 0.33
CLIP2Q9UDT6 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLIP2Q9UDT6 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLIP2Q9UDT6 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLIP2Q9UDT6 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC17.13■□□□□ 0.33
CLIP2Q9UDT6 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC17.13■□□□□ 0.33
CLIP2Q9UDT6 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC17.13■□□□□ 0.33
CLIP2Q9UDT6 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLIP2Q9UDT6 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC17.13■□□□□ 0.33
CLIP2Q9UDT6 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLIP2Q9UDT6 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC17.13■□□□□ 0.33
CLIP2Q9UDT6 NUP210P1-202ENST00000504322 710 ntBASIC17.13■□□□□ 0.33
CLIP2Q9UDT6 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC17.13■□□□□ 0.33
CLIP2Q9UDT6 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC17.13■□□□□ 0.33
CLIP2Q9UDT6 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC17.13■□□□□ 0.33
CLIP2Q9UDT6 AL161670.2-201ENST00000557650 1227 ntBASIC17.13■□□□□ 0.33
CLIP2Q9UDT6 AC105129.2-201ENST00000559536 390 ntBASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms