Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC14.04□□□□□ -0.16
CUEDC1Q9NWM3 PCBP2-OT1-201ENST00000634357 590 ntBASIC14.04□□□□□ -0.16
CUEDC1Q9NWM3 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CUEDC1Q9NWM3 PTENP1-202ENST00000532280 3996 ntBASIC14.04□□□□□ -0.16
CUEDC1Q9NWM3 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CUEDC1Q9NWM3 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CUEDC1Q9NWM3 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CUEDC1Q9NWM3 RAB5A-203ENST00000422242 1443 ntTSL 2 BASIC14.04□□□□□ -0.16
CUEDC1Q9NWM3 KRT8P19-201ENST00000551916 1455 ntBASIC14.04□□□□□ -0.16
CUEDC1Q9NWM3 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CUEDC1Q9NWM3 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.04□□□□□ -0.16
CUEDC1Q9NWM3 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.04□□□□□ -0.16
CUEDC1Q9NWM3 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CUEDC1Q9NWM3 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CUEDC1Q9NWM3 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CUEDC1Q9NWM3 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CUEDC1Q9NWM3 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC14.04□□□□□ -0.16
CUEDC1Q9NWM3 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CUEDC1Q9NWM3 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CUEDC1Q9NWM3 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CUEDC1Q9NWM3 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.04□□□□□ -0.16
CUEDC1Q9NWM3 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CUEDC1Q9NWM3 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.04□□□□□ -0.16
CUEDC1Q9NWM3 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
CUEDC1Q9NWM3 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.03□□□□□ -0.16
CUEDC1Q9NWM3 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CUEDC1Q9NWM3 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CUEDC1Q9NWM3 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CUEDC1Q9NWM3 AC136759.1-202ENST00000530858 2194 ntBASIC14.03□□□□□ -0.16
CUEDC1Q9NWM3 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CUEDC1Q9NWM3 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.03□□□□□ -0.16
CUEDC1Q9NWM3 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.03□□□□□ -0.16
CUEDC1Q9NWM3 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC14.03□□□□□ -0.16
CUEDC1Q9NWM3 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CUEDC1Q9NWM3 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CUEDC1Q9NWM3 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CUEDC1Q9NWM3 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
CUEDC1Q9NWM3 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.03□□□□□ -0.16
CUEDC1Q9NWM3 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CUEDC1Q9NWM3 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CUEDC1Q9NWM3 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.03□□□□□ -0.16
CUEDC1Q9NWM3 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CUEDC1Q9NWM3 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC14.03□□□□□ -0.16
CUEDC1Q9NWM3 GAS5-209ENST00000430245 723 ntTSL 3 BASIC14.03□□□□□ -0.16
CUEDC1Q9NWM3 FAM58BP-201ENST00000439056 645 ntBASIC14.03□□□□□ -0.16
CUEDC1Q9NWM3 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC14.03□□□□□ -0.16
CUEDC1Q9NWM3 RPS2P36-201ENST00000456516 831 ntBASIC14.03□□□□□ -0.16
CUEDC1Q9NWM3 APOA2-204ENST00000464492 530 ntTSL 3 BASIC14.03□□□□□ -0.16
CUEDC1Q9NWM3 RPL18P13-201ENST00000478088 569 ntBASIC14.03□□□□□ -0.16
CUEDC1Q9NWM3 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC14.03□□□□□ -0.16
CUEDC1Q9NWM3 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC14.03□□□□□ -0.16
CUEDC1Q9NWM3 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC14.03□□□□□ -0.16
CUEDC1Q9NWM3 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC14.03□□□□□ -0.16
CUEDC1Q9NWM3 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CUEDC1Q9NWM3 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC14.03□□□□□ -0.16
CUEDC1Q9NWM3 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.03□□□□□ -0.16
CUEDC1Q9NWM3 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CUEDC1Q9NWM3 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC14.03□□□□□ -0.16
CUEDC1Q9NWM3 MIR4706-201ENST00000582134 82 ntBASIC14.03□□□□□ -0.16
CUEDC1Q9NWM3 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC14.03□□□□□ -0.16
CUEDC1Q9NWM3 AC009884.2-201ENST00000603110 324 ntBASIC14.03□□□□□ -0.16
CUEDC1Q9NWM3 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC14.03□□□□□ -0.16
CUEDC1Q9NWM3 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
CUEDC1Q9NWM3 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC14.03□□□□□ -0.16
CUEDC1Q9NWM3 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CUEDC1Q9NWM3 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CUEDC1Q9NWM3 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CUEDC1Q9NWM3 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CUEDC1Q9NWM3 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC14.03□□□□□ -0.16
CUEDC1Q9NWM3 AC087386.2-201ENST00000623212 4637 ntBASIC14.03□□□□□ -0.16
CUEDC1Q9NWM3 CYP4F23P-201ENST00000593402 1579 ntBASIC14.03□□□□□ -0.16
CUEDC1Q9NWM3 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC14.03□□□□□ -0.16
CUEDC1Q9NWM3 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CUEDC1Q9NWM3 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CUEDC1Q9NWM3 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CUEDC1Q9NWM3 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC14.03□□□□□ -0.16
CUEDC1Q9NWM3 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CUEDC1Q9NWM3 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.03□□□□□ -0.16
CUEDC1Q9NWM3 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CUEDC1Q9NWM3 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CUEDC1Q9NWM3 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CUEDC1Q9NWM3 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CUEDC1Q9NWM3 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CUEDC1Q9NWM3 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.03□□□□□ -0.16
CUEDC1Q9NWM3 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CUEDC1Q9NWM3 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CUEDC1Q9NWM3 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CUEDC1Q9NWM3 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
CUEDC1Q9NWM3 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.02□□□□□ -0.16
CUEDC1Q9NWM3 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CUEDC1Q9NWM3 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
CUEDC1Q9NWM3 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CUEDC1Q9NWM3 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CUEDC1Q9NWM3 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CUEDC1Q9NWM3 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
CUEDC1Q9NWM3 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CUEDC1Q9NWM3 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.02□□□□□ -0.16
CUEDC1Q9NWM3 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
CUEDC1Q9NWM3 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
CUEDC1Q9NWM3 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms