Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.82
SLC52A1Q9NWF4 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
SLC52A1Q9NWF4 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC20.14■□□□□ 0.82
SLC52A1Q9NWF4 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC20.14■□□□□ 0.81
SLC52A1Q9NWF4 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
SLC52A1Q9NWF4 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLC52A1Q9NWF4 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
SLC52A1Q9NWF4 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLC52A1Q9NWF4 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC20.14■□□□□ 0.81
SLC52A1Q9NWF4 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLC52A1Q9NWF4 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLC52A1Q9NWF4 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLC52A1Q9NWF4 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC20.14■□□□□ 0.81
SLC52A1Q9NWF4 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLC52A1Q9NWF4 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLC52A1Q9NWF4 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SLC52A1Q9NWF4 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SLC52A1Q9NWF4 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC20.14■□□□□ 0.81
SLC52A1Q9NWF4 AC020931.1-201ENST00000589622 1346 ntBASIC20.14■□□□□ 0.81
SLC52A1Q9NWF4 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLC52A1Q9NWF4 HLA-DMA-202ENST00000395303 1007 ntBASIC20.14■□□□□ 0.81
SLC52A1Q9NWF4 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLC52A1Q9NWF4 LINC00303-203ENST00000427799 1028 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SLC52A1Q9NWF4 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC20.14■□□□□ 0.81
SLC52A1Q9NWF4 ZNF877P-201ENST00000437614 612 ntBASIC20.14■□□□□ 0.81
SLC52A1Q9NWF4 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC20.14■□□□□ 0.81
SLC52A1Q9NWF4 GULOP-201ENST00000454030 748 ntBASIC20.14■□□□□ 0.81
SLC52A1Q9NWF4 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC20.14■□□□□ 0.81
SLC52A1Q9NWF4 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SLC52A1Q9NWF4 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC20.14■□□□□ 0.81
SLC52A1Q9NWF4 AC004801.1-201ENST00000549557 360 ntBASIC20.14■□□□□ 0.81
SLC52A1Q9NWF4 MIR4326-201ENST00000582203 59 ntBASIC20.14■□□□□ 0.81
SLC52A1Q9NWF4 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC20.14■□□□□ 0.81
SLC52A1Q9NWF4 CSTP2-201ENST00000610599 398 ntBASIC20.14■□□□□ 0.81
SLC52A1Q9NWF4 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SLC52A1Q9NWF4 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SLC52A1Q9NWF4 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
SLC52A1Q9NWF4 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SLC52A1Q9NWF4 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SLC52A1Q9NWF4 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC20.14■□□□□ 0.81
SLC52A1Q9NWF4 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC20.14■□□□□ 0.81
SLC52A1Q9NWF4 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
SLC52A1Q9NWF4 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
SLC52A1Q9NWF4 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
SLC52A1Q9NWF4 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLC52A1Q9NWF4 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
SLC52A1Q9NWF4 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLC52A1Q9NWF4 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLC52A1Q9NWF4 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLC52A1Q9NWF4 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC20.13■□□□□ 0.81
SLC52A1Q9NWF4 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLC52A1Q9NWF4 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC20.13■□□□□ 0.81
SLC52A1Q9NWF4 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLC52A1Q9NWF4 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SLC52A1Q9NWF4 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLC52A1Q9NWF4 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SLC52A1Q9NWF4 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC20.13■□□□□ 0.81
SLC52A1Q9NWF4 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC20.13■□□□□ 0.81
SLC52A1Q9NWF4 HNRNPA1P21-201ENST00000424115 961 ntBASIC20.13■□□□□ 0.81
SLC52A1Q9NWF4 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
SLC52A1Q9NWF4 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
SLC52A1Q9NWF4 TBC1D3P6-201ENST00000505954 962 ntBASIC20.13■□□□□ 0.81
SLC52A1Q9NWF4 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC20.13■□□□□ 0.81
SLC52A1Q9NWF4 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC20.13■□□□□ 0.81
SLC52A1Q9NWF4 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC20.13■□□□□ 0.81
SLC52A1Q9NWF4 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC20.13■□□□□ 0.81
SLC52A1Q9NWF4 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC20.13■□□□□ 0.81
SLC52A1Q9NWF4 HNRNPA1P16-201ENST00000575692 955 ntBASIC20.13■□□□□ 0.81
SLC52A1Q9NWF4 RN7SL605P-201ENST00000577229 281 ntBASIC20.13■□□□□ 0.81
SLC52A1Q9NWF4 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC20.13■□□□□ 0.81
SLC52A1Q9NWF4 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC20.13■□□□□ 0.81
SLC52A1Q9NWF4 GGNBP1-204ENST00000613113 887 ntBASIC20.13■□□□□ 0.81
SLC52A1Q9NWF4 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC20.13■□□□□ 0.81
SLC52A1Q9NWF4 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLC52A1Q9NWF4 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
SLC52A1Q9NWF4 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLC52A1Q9NWF4 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC20.13■□□□□ 0.81
SLC52A1Q9NWF4 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SLC52A1Q9NWF4 POR-201ENST00000394893 2532 ntTSL 5 BASIC20.13■□□□□ 0.81
SLC52A1Q9NWF4 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLC52A1Q9NWF4 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SLC52A1Q9NWF4 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLC52A1Q9NWF4 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC52A1Q9NWF4 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC20.12■□□□□ 0.81
SLC52A1Q9NWF4 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC52A1Q9NWF4 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC52A1Q9NWF4 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC20.12■□□□□ 0.81
SLC52A1Q9NWF4 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC52A1Q9NWF4 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
SLC52A1Q9NWF4 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC52A1Q9NWF4 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
SLC52A1Q9NWF4 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC52A1Q9NWF4 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SLC52A1Q9NWF4 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SLC52A1Q9NWF4 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC52A1Q9NWF4 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC52A1Q9NWF4 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
SLC52A1Q9NWF4 IFNWP2-201ENST00000431203 580 ntBASIC20.12■□□□□ 0.81
SLC52A1Q9NWF4 AC092810.2-201ENST00000431570 362 ntBASIC20.12■□□□□ 0.81
SLC52A1Q9NWF4 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms