Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC13.18□□□□□ -0.3
RSPO3Q9BXY4 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC13.18□□□□□ -0.3
RSPO3Q9BXY4 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC13.18□□□□□ -0.3
RSPO3Q9BXY4 RBM7-207ENST00000544582 692 ntTSL 3 BASIC13.18□□□□□ -0.3
RSPO3Q9BXY4 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC13.18□□□□□ -0.3
RSPO3Q9BXY4 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC13.18□□□□□ -0.3
RSPO3Q9BXY4 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC13.18□□□□□ -0.3
RSPO3Q9BXY4 NAA38-206ENST00000576384 424 ntTSL 2 BASIC13.18□□□□□ -0.3
RSPO3Q9BXY4 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RSPO3Q9BXY4 AC005324.6-201ENST00000587972 613 ntBASIC13.18□□□□□ -0.3
RSPO3Q9BXY4 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC13.18□□□□□ -0.3
RSPO3Q9BXY4 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RSPO3Q9BXY4 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
RSPO3Q9BXY4 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
RSPO3Q9BXY4 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC13.18□□□□□ -0.3
RSPO3Q9BXY4 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC13.18□□□□□ -0.3
RSPO3Q9BXY4 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC13.18□□□□□ -0.3
RSPO3Q9BXY4 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC13.18□□□□□ -0.3
RSPO3Q9BXY4 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RSPO3Q9BXY4 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC13.18□□□□□ -0.3
RSPO3Q9BXY4 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RSPO3Q9BXY4 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RSPO3Q9BXY4 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC13.18□□□□□ -0.3
RSPO3Q9BXY4 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RSPO3Q9BXY4 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
RSPO3Q9BXY4 FAM90A7P-201ENST00000382628 1395 ntBASIC13.18□□□□□ -0.3
RSPO3Q9BXY4 FAM90A23P-201ENST00000400136 1395 ntBASIC13.18□□□□□ -0.3
RSPO3Q9BXY4 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RSPO3Q9BXY4 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RSPO3Q9BXY4 SALL4P6-201ENST00000429385 1691 ntBASIC13.18□□□□□ -0.3
RSPO3Q9BXY4 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RSPO3Q9BXY4 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RSPO3Q9BXY4 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RSPO3Q9BXY4 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
RSPO3Q9BXY4 PCDHA6-201ENST00000378126 3267 ntBASIC13.17□□□□□ -0.3
RSPO3Q9BXY4 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RSPO3Q9BXY4 AL356585.2-201ENST00000625078 2396 ntBASIC13.17□□□□□ -0.3
RSPO3Q9BXY4 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RSPO3Q9BXY4 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RSPO3Q9BXY4 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RSPO3Q9BXY4 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC13.17□□□□□ -0.3
RSPO3Q9BXY4 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
RSPO3Q9BXY4 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC13.17□□□□□ -0.3
RSPO3Q9BXY4 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
RSPO3Q9BXY4 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.17□□□□□ -0.3
RSPO3Q9BXY4 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
RSPO3Q9BXY4 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
RSPO3Q9BXY4 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC13.17□□□□□ -0.3
RSPO3Q9BXY4 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RSPO3Q9BXY4 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
RSPO3Q9BXY4 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RSPO3Q9BXY4 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RSPO3Q9BXY4 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.17□□□□□ -0.3
RSPO3Q9BXY4 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
RSPO3Q9BXY4 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC13.17□□□□□ -0.3
RSPO3Q9BXY4 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RSPO3Q9BXY4 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
RSPO3Q9BXY4 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
RSPO3Q9BXY4 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC13.17□□□□□ -0.3
RSPO3Q9BXY4 HLA-V-201ENST00000429037 534 ntBASIC13.17□□□□□ -0.3
RSPO3Q9BXY4 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
RSPO3Q9BXY4 AK2P2-201ENST00000439142 405 ntBASIC13.17□□□□□ -0.3
RSPO3Q9BXY4 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RSPO3Q9BXY4 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC13.17□□□□□ -0.3
RSPO3Q9BXY4 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RSPO3Q9BXY4 AC023310.1-201ENST00000554836 735 ntBASIC13.17□□□□□ -0.3
RSPO3Q9BXY4 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC13.17□□□□□ -0.3
RSPO3Q9BXY4 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RSPO3Q9BXY4 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC13.17□□□□□ -0.3
RSPO3Q9BXY4 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC13.17□□□□□ -0.3
RSPO3Q9BXY4 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RSPO3Q9BXY4 AC244157.2-201ENST00000616239 1006 ntBASIC13.17□□□□□ -0.3
RSPO3Q9BXY4 PCBP2-OT1-201ENST00000634357 590 ntBASIC13.17□□□□□ -0.3
RSPO3Q9BXY4 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
RSPO3Q9BXY4 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC13.17□□□□□ -0.3
RSPO3Q9BXY4 LINC00638-201ENST00000555578 2518 ntBASIC13.17□□□□□ -0.3
RSPO3Q9BXY4 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RSPO3Q9BXY4 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC13.17□□□□□ -0.3
RSPO3Q9BXY4 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RSPO3Q9BXY4 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RSPO3Q9BXY4 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC13.17□□□□□ -0.3
RSPO3Q9BXY4 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC13.17□□□□□ -0.3
RSPO3Q9BXY4 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RSPO3Q9BXY4 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
RSPO3Q9BXY4 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
RSPO3Q9BXY4 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
RSPO3Q9BXY4 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
RSPO3Q9BXY4 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RSPO3Q9BXY4 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
RSPO3Q9BXY4 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RSPO3Q9BXY4 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RSPO3Q9BXY4 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC13.16□□□□□ -0.3
RSPO3Q9BXY4 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC13.16□□□□□ -0.3
RSPO3Q9BXY4 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
RSPO3Q9BXY4 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RSPO3Q9BXY4 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
RSPO3Q9BXY4 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC13.16□□□□□ -0.3
RSPO3Q9BXY4 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RSPO3Q9BXY4 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RSPO3Q9BXY4 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms