Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NICN1Q9BSH3 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
NICN1Q9BSH3 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NICN1Q9BSH3 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NICN1Q9BSH3 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NICN1Q9BSH3 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NICN1Q9BSH3 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC12.45□□□□□ -0.42
NICN1Q9BSH3 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NICN1Q9BSH3 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
NICN1Q9BSH3 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC12.45□□□□□ -0.42
NICN1Q9BSH3 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NICN1Q9BSH3 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NICN1Q9BSH3 INVS-201ENST00000262456 2968 ntTSL 5 BASIC12.45□□□□□ -0.42
NICN1Q9BSH3 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NICN1Q9BSH3 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
NICN1Q9BSH3 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NICN1Q9BSH3 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC12.45□□□□□ -0.42
NICN1Q9BSH3 MESTP3-201ENST00000503460 968 ntBASIC12.45□□□□□ -0.42
NICN1Q9BSH3 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
NICN1Q9BSH3 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
NICN1Q9BSH3 AC005498.2-205ENST00000593218 784 ntBASIC12.45□□□□□ -0.42
NICN1Q9BSH3 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC12.45□□□□□ -0.42
NICN1Q9BSH3 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
NICN1Q9BSH3 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NICN1Q9BSH3 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
NICN1Q9BSH3 AL356585.2-201ENST00000625078 2396 ntBASIC12.45□□□□□ -0.42
NICN1Q9BSH3 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NICN1Q9BSH3 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
NICN1Q9BSH3 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NICN1Q9BSH3 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NICN1Q9BSH3 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
NICN1Q9BSH3 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
NICN1Q9BSH3 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NICN1Q9BSH3 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
NICN1Q9BSH3 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
NICN1Q9BSH3 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
NICN1Q9BSH3 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
NICN1Q9BSH3 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NICN1Q9BSH3 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NICN1Q9BSH3 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC12.45□□□□□ -0.42
NICN1Q9BSH3 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
NICN1Q9BSH3 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NICN1Q9BSH3 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NICN1Q9BSH3 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
NICN1Q9BSH3 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NICN1Q9BSH3 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NICN1Q9BSH3 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NICN1Q9BSH3 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
NICN1Q9BSH3 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NICN1Q9BSH3 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC12.44□□□□□ -0.42
NICN1Q9BSH3 TP73-213ENST00000604479 1623 ntTSL 5 BASIC12.44□□□□□ -0.42
NICN1Q9BSH3 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NICN1Q9BSH3 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC12.44□□□□□ -0.42
NICN1Q9BSH3 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NICN1Q9BSH3 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NICN1Q9BSH3 AC009093.2-202ENST00000620513 2079 ntBASIC12.44□□□□□ -0.42
NICN1Q9BSH3 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC12.44□□□□□ -0.42
NICN1Q9BSH3 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NICN1Q9BSH3 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NICN1Q9BSH3 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
NICN1Q9BSH3 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NICN1Q9BSH3 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
NICN1Q9BSH3 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
NICN1Q9BSH3 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NICN1Q9BSH3 ACKR1-201ENST00000368121 1240 ntBASIC12.44□□□□□ -0.42
NICN1Q9BSH3 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NICN1Q9BSH3 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NICN1Q9BSH3 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC12.44□□□□□ -0.42
NICN1Q9BSH3 POM121L8P-201ENST00000417732 1281 ntBASIC12.44□□□□□ -0.42
NICN1Q9BSH3 POM121L9P-203ENST00000441984 1285 ntBASIC12.44□□□□□ -0.42
NICN1Q9BSH3 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC12.44□□□□□ -0.42
NICN1Q9BSH3 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NICN1Q9BSH3 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC12.44□□□□□ -0.42
NICN1Q9BSH3 AL391280.1-201ENST00000506969 1062 ntBASIC12.44□□□□□ -0.42
NICN1Q9BSH3 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC12.44□□□□□ -0.42
NICN1Q9BSH3 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NICN1Q9BSH3 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
NICN1Q9BSH3 AC138466.3-201ENST00000619983 221 ntBASIC12.44□□□□□ -0.42
NICN1Q9BSH3 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
NICN1Q9BSH3 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NICN1Q9BSH3 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
NICN1Q9BSH3 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NICN1Q9BSH3 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC12.44□□□□□ -0.42
NICN1Q9BSH3 TSN-212ENST00000536142 3328 ntTSL 2 BASIC12.44□□□□□ -0.42
NICN1Q9BSH3 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC12.44□□□□□ -0.42
NICN1Q9BSH3 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC12.44□□□□□ -0.42
NICN1Q9BSH3 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NICN1Q9BSH3 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NICN1Q9BSH3 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC12.44□□□□□ -0.42
NICN1Q9BSH3 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC12.44□□□□□ -0.42
NICN1Q9BSH3 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NICN1Q9BSH3 AC005014.1-201ENST00000432006 2976 ntBASIC12.44□□□□□ -0.42
NICN1Q9BSH3 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
NICN1Q9BSH3 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
NICN1Q9BSH3 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NICN1Q9BSH3 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
NICN1Q9BSH3 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
NICN1Q9BSH3 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC12.44□□□□□ -0.42
NICN1Q9BSH3 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
NICN1Q9BSH3 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms