Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN18Q99952 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN18Q99952 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN18Q99952 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN18Q99952 AL109954.1-202ENST00000564051 2148 ntBASIC16.18■□□□□ 0.18
PTPN18Q99952 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN18Q99952 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN18Q99952 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PTPN18Q99952 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PTPN18Q99952 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC16.17■□□□□ 0.18
PTPN18Q99952 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PTPN18Q99952 PAUPAR-201ENST00000630360 2965 ntBASIC16.17■□□□□ 0.18
PTPN18Q99952 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTPN18Q99952 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTPN18Q99952 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PTPN18Q99952 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
PTPN18Q99952 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC16.17■□□□□ 0.18
PTPN18Q99952 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.17■□□□□ 0.18
PTPN18Q99952 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTPN18Q99952 C18orf21-202ENST00000333234 958 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PTPN18Q99952 HHLA3-202ENST00000361764 692 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
PTPN18Q99952 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC16.17■□□□□ 0.18
PTPN18Q99952 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC16.17■□□□□ 0.18
PTPN18Q99952 ACTBP14-201ENST00000411655 1089 ntBASIC16.17■□□□□ 0.18
PTPN18Q99952 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC16.17■□□□□ 0.18
PTPN18Q99952 AC092810.2-201ENST00000431570 362 ntBASIC16.17■□□□□ 0.18
PTPN18Q99952 RHOQP2-201ENST00000449922 579 ntBASIC16.17■□□□□ 0.18
PTPN18Q99952 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC16.17■□□□□ 0.18
PTPN18Q99952 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC16.17■□□□□ 0.18
PTPN18Q99952 AC015909.5-201ENST00000624336 2266 ntBASIC16.17■□□□□ 0.18
PTPN18Q99952 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTPN18Q99952 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTPN18Q99952 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTPN18Q99952 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTPN18Q99952 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
PTPN18Q99952 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTPN18Q99952 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTPN18Q99952 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTPN18Q99952 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.17■□□□□ 0.18
PTPN18Q99952 FAM226B-201ENST00000602508 1490 ntBASIC16.16■□□□□ 0.18
PTPN18Q99952 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTPN18Q99952 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
PTPN18Q99952 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
PTPN18Q99952 MAD2L1BP-202ENST00000451025 1517 ntTSL 2 BASIC16.16■□□□□ 0.18
PTPN18Q99952 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
PTPN18Q99952 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
PTPN18Q99952 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTPN18Q99952 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
PTPN18Q99952 AGAP7P-201ENST00000582299 2062 ntBASIC16.16■□□□□ 0.18
PTPN18Q99952 AGAP14-201ENST00000624701 2060 ntBASIC16.16■□□□□ 0.18
PTPN18Q99952 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTPN18Q99952 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC16.16■□□□□ 0.18
PTPN18Q99952 TXNL4B-203ENST00000426362 965 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
PTPN18Q99952 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC16.16■□□□□ 0.18
PTPN18Q99952 AC147876.1-201ENST00000504408 322 ntBASIC16.16■□□□□ 0.18
PTPN18Q99952 CTBP2P6-201ENST00000526402 1229 ntBASIC16.16■□□□□ 0.18
PTPN18Q99952 LINC01490-202ENST00000551399 1260 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PTPN18Q99952 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC16.16■□□□□ 0.18
PTPN18Q99952 SPAG5-AS1-204ENST00000556050 871 ntTSL 2 BASIC16.16■□□□□ 0.18
PTPN18Q99952 AC005786.2-201ENST00000592368 369 ntTSL 3 BASIC16.16■□□□□ 0.18
PTPN18Q99952 BX322534.1-201ENST00000635574 241 ntBASIC16.16■□□□□ 0.18
PTPN18Q99952 AC215524.1-201ENST00000635696 241 ntBASIC16.16■□□□□ 0.18
PTPN18Q99952 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC16.16■□□□□ 0.18
PTPN18Q99952 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTPN18Q99952 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PTPN18Q99952 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTPN18Q99952 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PTPN18Q99952 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTPN18Q99952 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PTPN18Q99952 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTPN18Q99952 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTPN18Q99952 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTPN18Q99952 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTPN18Q99952 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PTPN18Q99952 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
PTPN18Q99952 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PTPN18Q99952 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC16.15■□□□□ 0.18
PTPN18Q99952 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PTPN18Q99952 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PTPN18Q99952 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
PTPN18Q99952 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTPN18Q99952 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTPN18Q99952 SALL4P6-201ENST00000429385 1691 ntBASIC16.15■□□□□ 0.18
PTPN18Q99952 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTPN18Q99952 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PTPN18Q99952 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTPN18Q99952 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTPN18Q99952 CSHL1-201ENST00000259003 739 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PTPN18Q99952 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC16.15■□□□□ 0.18
PTPN18Q99952 FCN2-202ENST00000350339 943 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
PTPN18Q99952 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.15■□□□□ 0.18
PTPN18Q99952 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
PTPN18Q99952 AHCYP3-201ENST00000420053 1279 ntBASIC16.15■□□□□ 0.18
PTPN18Q99952 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC16.15■□□□□ 0.18
PTPN18Q99952 EEF1DP2-201ENST00000433698 843 ntBASIC16.15■□□□□ 0.18
PTPN18Q99952 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC16.15■□□□□ 0.18
PTPN18Q99952 AC133141.1-201ENST00000443015 339 ntBASIC16.15■□□□□ 0.18
PTPN18Q99952 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC16.15■□□□□ 0.18
PTPN18Q99952 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PTPN18Q99952 CSHL1-206ENST00000450719 973 ntTSL 2 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms