Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC14.06□□□□□ -0.16
PKP4Q99569 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PKP4Q99569 DPM3-202ENST00000368399 517 ntBASIC14.06□□□□□ -0.16
PKP4Q99569 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC14.06□□□□□ -0.16
PKP4Q99569 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC14.06□□□□□ -0.16
PKP4Q99569 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PKP4Q99569 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC14.06□□□□□ -0.16
PKP4Q99569 AC126915.1-201ENST00000522847 1038 ntBASIC14.06□□□□□ -0.16
PKP4Q99569 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC14.06□□□□□ -0.16
PKP4Q99569 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PKP4Q99569 PGAM1P5-201ENST00000548011 764 ntBASIC14.06□□□□□ -0.16
PKP4Q99569 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC14.06□□□□□ -0.16
PKP4Q99569 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC14.06□□□□□ -0.16
PKP4Q99569 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC14.06□□□□□ -0.16
PKP4Q99569 AL118558.3-201ENST00000607414 1079 ntBASIC14.06□□□□□ -0.16
PKP4Q99569 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC14.06□□□□□ -0.16
PKP4Q99569 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PKP4Q99569 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.06□□□□□ -0.16
PKP4Q99569 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PKP4Q99569 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC14.06□□□□□ -0.16
PKP4Q99569 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
PKP4Q99569 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
PKP4Q99569 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC14.06□□□□□ -0.16
PKP4Q99569 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PKP4Q99569 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PKP4Q99569 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PKP4Q99569 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
PKP4Q99569 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PKP4Q99569 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PKP4Q99569 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PKP4Q99569 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.06□□□□□ -0.16
PKP4Q99569 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.06□□□□□ -0.16
PKP4Q99569 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.06□□□□□ -0.16
PKP4Q99569 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PKP4Q99569 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PKP4Q99569 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
PKP4Q99569 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
PKP4Q99569 LAP3P2-201ENST00000454686 1454 ntBASIC14.06□□□□□ -0.16
PKP4Q99569 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PKP4Q99569 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PKP4Q99569 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.05□□□□□ -0.16
PKP4Q99569 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PKP4Q99569 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.05□□□□□ -0.16
PKP4Q99569 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PKP4Q99569 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.05□□□□□ -0.16
PKP4Q99569 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.05□□□□□ -0.16
PKP4Q99569 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PKP4Q99569 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
PKP4Q99569 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PKP4Q99569 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
PKP4Q99569 PTENP1-202ENST00000532280 3996 ntBASIC14.05□□□□□ -0.16
PKP4Q99569 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
PKP4Q99569 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC14.05□□□□□ -0.16
PKP4Q99569 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PKP4Q99569 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PKP4Q99569 AC018629.1-201ENST00000623381 1736 ntBASIC14.05□□□□□ -0.16
PKP4Q99569 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PKP4Q99569 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
PKP4Q99569 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PKP4Q99569 MST1P2-201ENST00000457982 2291 ntBASIC14.05□□□□□ -0.16
PKP4Q99569 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PKP4Q99569 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC14.05□□□□□ -0.16
PKP4Q99569 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PKP4Q99569 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
PKP4Q99569 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PKP4Q99569 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
PKP4Q99569 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PKP4Q99569 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC14.05□□□□□ -0.16
PKP4Q99569 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC14.05□□□□□ -0.16
PKP4Q99569 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC14.05□□□□□ -0.16
PKP4Q99569 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
PKP4Q99569 SERPINA13P-202ENST00000478994 924 ntBASIC14.05□□□□□ -0.16
PKP4Q99569 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
PKP4Q99569 AC022217.1-201ENST00000521069 738 ntBASIC14.05□□□□□ -0.16
PKP4Q99569 FADS2-212ENST00000522639 360 ntTSL 5 BASIC14.05□□□□□ -0.16
PKP4Q99569 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PKP4Q99569 SNORD3B-2-202ENST00000571722 791 ntBASIC14.05□□□□□ -0.16
PKP4Q99569 FADS2-215ENST00000574708 385 ntTSL 3 BASIC14.05□□□□□ -0.16
PKP4Q99569 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC14.05□□□□□ -0.16
PKP4Q99569 AC090164.2-201ENST00000611487 516 ntBASIC14.05□□□□□ -0.16
PKP4Q99569 AC092299.1-201ENST00000632679 757 ntBASIC14.05□□□□□ -0.16
PKP4Q99569 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC14.05□□□□□ -0.16
PKP4Q99569 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PKP4Q99569 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PKP4Q99569 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PKP4Q99569 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PKP4Q99569 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PKP4Q99569 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PKP4Q99569 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PKP4Q99569 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC14.05□□□□□ -0.16
PKP4Q99569 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
PKP4Q99569 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PKP4Q99569 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PKP4Q99569 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC14.05□□□□□ -0.16
PKP4Q99569 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PKP4Q99569 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PKP4Q99569 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
PKP4Q99569 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.05□□□□□ -0.16
PKP4Q99569 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PKP4Q99569 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms