Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
CPNE2Q96FN4 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CPNE2Q96FN4 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CPNE2Q96FN4 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CPNE2Q96FN4 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC12.66□□□□□ -0.38
CPNE2Q96FN4 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CPNE2Q96FN4 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CPNE2Q96FN4 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CPNE2Q96FN4 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CPNE2Q96FN4 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CPNE2Q96FN4 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CPNE2Q96FN4 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CPNE2Q96FN4 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CPNE2Q96FN4 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CPNE2Q96FN4 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CPNE2Q96FN4 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CPNE2Q96FN4 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC12.66□□□□□ -0.38
CPNE2Q96FN4 SPTLC1P1-201ENST00000447199 261 ntBASIC12.66□□□□□ -0.38
CPNE2Q96FN4 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CPNE2Q96FN4 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC12.66□□□□□ -0.38
CPNE2Q96FN4 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CPNE2Q96FN4 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC12.66□□□□□ -0.38
CPNE2Q96FN4 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC12.66□□□□□ -0.38
CPNE2Q96FN4 SORD2P-201ENST00000558556 1069 ntBASIC12.66□□□□□ -0.38
CPNE2Q96FN4 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC12.66□□□□□ -0.38
CPNE2Q96FN4 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CPNE2Q96FN4 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC12.66□□□□□ -0.38
CPNE2Q96FN4 BX088702.1-201ENST00000610784 235 ntBASIC12.66□□□□□ -0.38
CPNE2Q96FN4 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CPNE2Q96FN4 DGKD-202ENST00000409813 6228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CPNE2Q96FN4 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CPNE2Q96FN4 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC12.66□□□□□ -0.38
CPNE2Q96FN4 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CPNE2Q96FN4 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
CPNE2Q96FN4 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CPNE2Q96FN4 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
CPNE2Q96FN4 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CPNE2Q96FN4 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CPNE2Q96FN4 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
CPNE2Q96FN4 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CPNE2Q96FN4 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CPNE2Q96FN4 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC12.66□□□□□ -0.38
CPNE2Q96FN4 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CPNE2Q96FN4 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CPNE2Q96FN4 NLRC3-202ENST00000359128 6401 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CPNE2Q96FN4 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CPNE2Q96FN4 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CPNE2Q96FN4 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CPNE2Q96FN4 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
CPNE2Q96FN4 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
CPNE2Q96FN4 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC12.66□□□□□ -0.38
CPNE2Q96FN4 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CPNE2Q96FN4 AL805961.2-201ENST00000642139 4817 ntBASIC12.65□□□□□ -0.38
CPNE2Q96FN4 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CPNE2Q96FN4 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CPNE2Q96FN4 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CPNE2Q96FN4 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC12.65□□□□□ -0.38
CPNE2Q96FN4 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC12.65□□□□□ -0.38
CPNE2Q96FN4 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CPNE2Q96FN4 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CPNE2Q96FN4 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CPNE2Q96FN4 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC12.65□□□□□ -0.38
CPNE2Q96FN4 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CPNE2Q96FN4 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CPNE2Q96FN4 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC12.65□□□□□ -0.38
CPNE2Q96FN4 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CPNE2Q96FN4 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CPNE2Q96FN4 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CPNE2Q96FN4 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CPNE2Q96FN4 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC12.65□□□□□ -0.38
CPNE2Q96FN4 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
CPNE2Q96FN4 FAM207CP-201ENST00000443486 507 ntBASIC12.65□□□□□ -0.38
CPNE2Q96FN4 TMPRSS11CP-201ENST00000453277 683 ntBASIC12.65□□□□□ -0.38
CPNE2Q96FN4 TMEM198B-204ENST00000484016 896 ntBASIC12.65□□□□□ -0.38
CPNE2Q96FN4 MESTP3-201ENST00000503460 968 ntBASIC12.65□□□□□ -0.38
CPNE2Q96FN4 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC12.65□□□□□ -0.38
CPNE2Q96FN4 CDC23-208ENST00000505120 455 ntTSL 3 BASIC12.65□□□□□ -0.38
CPNE2Q96FN4 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC12.65□□□□□ -0.38
CPNE2Q96FN4 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC12.65□□□□□ -0.38
CPNE2Q96FN4 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC12.65□□□□□ -0.38
CPNE2Q96FN4 RFPL4AP1-201ENST00000530883 850 ntBASIC12.65□□□□□ -0.38
CPNE2Q96FN4 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC12.65□□□□□ -0.38
CPNE2Q96FN4 AC103988.2-201ENST00000561804 725 ntBASIC12.65□□□□□ -0.38
CPNE2Q96FN4 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC12.65□□□□□ -0.38
CPNE2Q96FN4 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC12.65□□□□□ -0.38
CPNE2Q96FN4 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC12.65□□□□□ -0.38
CPNE2Q96FN4 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
CPNE2Q96FN4 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC12.65□□□□□ -0.38
CPNE2Q96FN4 AC005498.2-205ENST00000593218 784 ntBASIC12.65□□□□□ -0.38
CPNE2Q96FN4 ENPP7P14-201ENST00000621765 1040 ntBASIC12.65□□□□□ -0.38
CPNE2Q96FN4 USP47-202ENST00000339865 7775 ntTSL 2 BASIC12.65□□□□□ -0.38
CPNE2Q96FN4 CACNA2D2-205ENST00000429770 5304 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
CPNE2Q96FN4 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CPNE2Q96FN4 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC12.65□□□□□ -0.38
CPNE2Q96FN4 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CPNE2Q96FN4 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CPNE2Q96FN4 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC12.65□□□□□ -0.38
CPNE2Q96FN4 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC12.65□□□□□ -0.38
CPNE2Q96FN4 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CPNE2Q96FN4 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms