Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 FUK-202ENST00000378912 3925 ntTSL 2 BASIC15.28■□□□□ 0.04
ATP2A3Q93084 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.28■□□□□ 0.04
ATP2A3Q93084 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATP2A3Q93084 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
ATP2A3Q93084 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATP2A3Q93084 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATP2A3Q93084 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC15.28■□□□□ 0.04
ATP2A3Q93084 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATP2A3Q93084 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATP2A3Q93084 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATP2A3Q93084 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATP2A3Q93084 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATP2A3Q93084 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC15.28■□□□□ 0.04
ATP2A3Q93084 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATP2A3Q93084 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATP2A3Q93084 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
ATP2A3Q93084 AC007274.2-201ENST00000421675 662 ntBASIC15.28■□□□□ 0.04
ATP2A3Q93084 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATP2A3Q93084 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC15.28■□□□□ 0.04
ATP2A3Q93084 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ATP2A3Q93084 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC15.28■□□□□ 0.04
ATP2A3Q93084 AC090857.1-201ENST00000527400 390 ntBASIC15.28■□□□□ 0.04
ATP2A3Q93084 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC15.28■□□□□ 0.04
ATP2A3Q93084 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC15.28■□□□□ 0.04
ATP2A3Q93084 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC15.28■□□□□ 0.04
ATP2A3Q93084 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC15.28■□□□□ 0.04
ATP2A3Q93084 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ATP2A3Q93084 SNORD3B-2-202ENST00000571722 791 ntBASIC15.28■□□□□ 0.04
ATP2A3Q93084 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
ATP2A3Q93084 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
ATP2A3Q93084 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC15.28■□□□□ 0.04
ATP2A3Q93084 RPL35-206ENST00000629845 340 ntTSL 5 BASIC15.28■□□□□ 0.04
ATP2A3Q93084 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATP2A3Q93084 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATP2A3Q93084 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATP2A3Q93084 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATP2A3Q93084 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ATP2A3Q93084 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
ATP2A3Q93084 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC15.28■□□□□ 0.04
ATP2A3Q93084 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
ATP2A3Q93084 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATP2A3Q93084 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
ATP2A3Q93084 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATP2A3Q93084 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
ATP2A3Q93084 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATP2A3Q93084 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ATP2A3Q93084 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
ATP2A3Q93084 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ATP2A3Q93084 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ATP2A3Q93084 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC15.27■□□□□ 0.04
ATP2A3Q93084 TKT-201ENST00000296289 1931 ntTSL 5 BASIC15.27■□□□□ 0.04
ATP2A3Q93084 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.27■□□□□ 0.04
ATP2A3Q93084 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ATP2A3Q93084 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC15.27■□□□□ 0.04
ATP2A3Q93084 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
ATP2A3Q93084 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ATP2A3Q93084 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
ATP2A3Q93084 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ATP2A3Q93084 LINC01230-201ENST00000625222 3017 ntBASIC15.27■□□□□ 0.04
ATP2A3Q93084 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ATP2A3Q93084 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
ATP2A3Q93084 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ATP2A3Q93084 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC15.27■□□□□ 0.04
ATP2A3Q93084 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ATP2A3Q93084 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ATP2A3Q93084 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.27■□□□□ 0.04
ATP2A3Q93084 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ATP2A3Q93084 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC15.27■□□□□ 0.04
ATP2A3Q93084 PTPA-217ENST00000434095 870 ntTSL 2 BASIC15.27■□□□□ 0.04
ATP2A3Q93084 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC15.27■□□□□ 0.04
ATP2A3Q93084 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC15.27■□□□□ 0.04
ATP2A3Q93084 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ATP2A3Q93084 RCC2P8-201ENST00000502779 1035 ntBASIC15.27■□□□□ 0.04
ATP2A3Q93084 AC134698.3-201ENST00000523880 214 ntBASIC15.27■□□□□ 0.04
ATP2A3Q93084 AC009779.1-201ENST00000551138 283 ntBASIC15.27■□□□□ 0.04
ATP2A3Q93084 AL160314.3-201ENST00000556041 767 ntBASIC15.27■□□□□ 0.04
ATP2A3Q93084 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC15.27■□□□□ 0.04
ATP2A3Q93084 RN7SL574P-201ENST00000581512 297 ntBASIC15.27■□□□□ 0.04
ATP2A3Q93084 BX088702.1-201ENST00000610784 235 ntBASIC15.27■□□□□ 0.04
ATP2A3Q93084 MIR6720-201ENST00000611664 98 ntBASIC15.27■□□□□ 0.04
ATP2A3Q93084 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ATP2A3Q93084 AC023090.2-201ENST00000625182 2110 ntBASIC15.27■□□□□ 0.04
ATP2A3Q93084 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ATP2A3Q93084 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ATP2A3Q93084 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC15.27■□□□□ 0.03
ATP2A3Q93084 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
ATP2A3Q93084 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
ATP2A3Q93084 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.03
ATP2A3Q93084 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
ATP2A3Q93084 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
ATP2A3Q93084 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ATP2A3Q93084 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ATP2A3Q93084 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ATP2A3Q93084 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
ATP2A3Q93084 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
ATP2A3Q93084 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC15.26■□□□□ 0.03
ATP2A3Q93084 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATP2A3Q93084 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATP2A3Q93084 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATP2A3Q93084 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms