Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 AC027369.6-201ENST00000525520 931 ntBASIC14.37□□□□□ -0.11
CKAP2Q8WWK9 AP001582.1-201ENST00000525856 295 ntBASIC14.37□□□□□ -0.11
CKAP2Q8WWK9 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.37□□□□□ -0.11
CKAP2Q8WWK9 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.37□□□□□ -0.11
CKAP2Q8WWK9 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CKAP2Q8WWK9 JPT2-214ENST00000569765 782 ntTSL 2 BASIC14.37□□□□□ -0.11
CKAP2Q8WWK9 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CKAP2Q8WWK9 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CKAP2Q8WWK9 SRD5A3P1-201ENST00000603021 949 ntBASIC14.37□□□□□ -0.11
CKAP2Q8WWK9 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC14.37□□□□□ -0.11
CKAP2Q8WWK9 MVK-217ENST00000639206 367 ntTSL 5 BASIC14.37□□□□□ -0.11
CKAP2Q8WWK9 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CKAP2Q8WWK9 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CKAP2Q8WWK9 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CKAP2Q8WWK9 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
CKAP2Q8WWK9 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CKAP2Q8WWK9 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC14.37□□□□□ -0.11
CKAP2Q8WWK9 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CKAP2Q8WWK9 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CKAP2Q8WWK9 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC14.37□□□□□ -0.11
CKAP2Q8WWK9 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC14.37□□□□□ -0.11
CKAP2Q8WWK9 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CKAP2Q8WWK9 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.37□□□□□ -0.11
CKAP2Q8WWK9 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.37□□□□□ -0.11
CKAP2Q8WWK9 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC14.37□□□□□ -0.11
CKAP2Q8WWK9 USP39-207ENST00000450066 2086 ntTSL 2 BASIC14.37□□□□□ -0.11
CKAP2Q8WWK9 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CKAP2Q8WWK9 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC14.37□□□□□ -0.11
CKAP2Q8WWK9 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC14.37□□□□□ -0.11
CKAP2Q8WWK9 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CKAP2Q8WWK9 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CKAP2Q8WWK9 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CKAP2Q8WWK9 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
CKAP2Q8WWK9 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC14.36□□□□□ -0.11
CKAP2Q8WWK9 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CKAP2Q8WWK9 AC104758.3-203ENST00000562938 2123 ntBASIC14.36□□□□□ -0.11
CKAP2Q8WWK9 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CKAP2Q8WWK9 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CKAP2Q8WWK9 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC14.36□□□□□ -0.11
CKAP2Q8WWK9 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CKAP2Q8WWK9 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CKAP2Q8WWK9 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC14.36□□□□□ -0.11
CKAP2Q8WWK9 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC14.36□□□□□ -0.11
CKAP2Q8WWK9 AC108024.1-201ENST00000626286 1721 ntBASIC14.36□□□□□ -0.11
CKAP2Q8WWK9 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CKAP2Q8WWK9 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CKAP2Q8WWK9 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CKAP2Q8WWK9 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CKAP2Q8WWK9 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CKAP2Q8WWK9 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
CKAP2Q8WWK9 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CKAP2Q8WWK9 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC14.36□□□□□ -0.11
CKAP2Q8WWK9 CNN2P11-201ENST00000429351 262 ntBASIC14.36□□□□□ -0.11
CKAP2Q8WWK9 PUDPP3-201ENST00000445368 636 ntBASIC14.36□□□□□ -0.11
CKAP2Q8WWK9 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC14.36□□□□□ -0.11
CKAP2Q8WWK9 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC14.36□□□□□ -0.11
CKAP2Q8WWK9 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC14.36□□□□□ -0.11
CKAP2Q8WWK9 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.36□□□□□ -0.11
CKAP2Q8WWK9 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CKAP2Q8WWK9 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC14.36□□□□□ -0.11
CKAP2Q8WWK9 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC14.36□□□□□ -0.11
CKAP2Q8WWK9 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CKAP2Q8WWK9 BRI3BPP1-201ENST00000594224 787 ntBASIC14.36□□□□□ -0.11
CKAP2Q8WWK9 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC14.36□□□□□ -0.11
CKAP2Q8WWK9 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.36□□□□□ -0.11
CKAP2Q8WWK9 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CKAP2Q8WWK9 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CKAP2Q8WWK9 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CKAP2Q8WWK9 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC14.36□□□□□ -0.11
CKAP2Q8WWK9 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CKAP2Q8WWK9 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CKAP2Q8WWK9 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC14.36□□□□□ -0.11
CKAP2Q8WWK9 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CKAP2Q8WWK9 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CKAP2Q8WWK9 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC14.36□□□□□ -0.11
CKAP2Q8WWK9 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.36□□□□□ -0.11
CKAP2Q8WWK9 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CKAP2Q8WWK9 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC14.36□□□□□ -0.11
CKAP2Q8WWK9 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC14.36□□□□□ -0.11
CKAP2Q8WWK9 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CKAP2Q8WWK9 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CKAP2Q8WWK9 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC14.36□□□□□ -0.11
CKAP2Q8WWK9 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CKAP2Q8WWK9 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CKAP2Q8WWK9 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CKAP2Q8WWK9 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CKAP2Q8WWK9 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CKAP2Q8WWK9 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CKAP2Q8WWK9 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CKAP2Q8WWK9 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC14.35□□□□□ -0.11
CKAP2Q8WWK9 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CKAP2Q8WWK9 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CKAP2Q8WWK9 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CKAP2Q8WWK9 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CKAP2Q8WWK9 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CKAP2Q8WWK9 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CKAP2Q8WWK9 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CKAP2Q8WWK9 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CKAP2Q8WWK9 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.35□□□□□ -0.11
CKAP2Q8WWK9 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms