Protein–RNA interactions for Protein: Q8TDI8

TMC1, Transmembrane channel-like protein 1, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1Q8TDI8 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TMC1Q8TDI8 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
TMC1Q8TDI8 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
TMC1Q8TDI8 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TMC1Q8TDI8 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC20.06■□□□□ 0.8
TMC1Q8TDI8 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
TMC1Q8TDI8 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC20.06■□□□□ 0.8
TMC1Q8TDI8 AL365209.1-201ENST00000624418 6473 ntBASIC20.06■□□□□ 0.8
TMC1Q8TDI8 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TMC1Q8TDI8 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
TMC1Q8TDI8 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
TMC1Q8TDI8 ST13P19-201ENST00000442505 1124 ntBASIC20.06■□□□□ 0.8
TMC1Q8TDI8 TMEM198B-204ENST00000484016 896 ntBASIC20.06■□□□□ 0.8
TMC1Q8TDI8 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TMC1Q8TDI8 RN7SL67P-201ENST00000492147 296 ntBASIC20.06■□□□□ 0.8
TMC1Q8TDI8 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC20.06■□□□□ 0.8
TMC1Q8TDI8 MIR3188-201ENST00000583494 85 ntBASIC20.06■□□□□ 0.8
TMC1Q8TDI8 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TMC1Q8TDI8 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC20.06■□□□□ 0.8
TMC1Q8TDI8 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC20.06■□□□□ 0.8
TMC1Q8TDI8 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC20.06■□□□□ 0.8
TMC1Q8TDI8 RETN-203ENST00000629642 400 ntTSL 5 BASIC20.06■□□□□ 0.8
TMC1Q8TDI8 AC128714.1-201ENST00000637035 887 ntBASIC20.06■□□□□ 0.8
TMC1Q8TDI8 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
TMC1Q8TDI8 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC20.06■□□□□ 0.8
TMC1Q8TDI8 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
TMC1Q8TDI8 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC20.06■□□□□ 0.8
TMC1Q8TDI8 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TMC1Q8TDI8 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
TMC1Q8TDI8 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC20.05■□□□□ 0.8
TMC1Q8TDI8 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TMC1Q8TDI8 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TMC1Q8TDI8 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
TMC1Q8TDI8 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TMC1Q8TDI8 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC20.05■□□□□ 0.8
TMC1Q8TDI8 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC20.05■□□□□ 0.8
TMC1Q8TDI8 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC20.05■□□□□ 0.8
TMC1Q8TDI8 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
TMC1Q8TDI8 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
TMC1Q8TDI8 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
TMC1Q8TDI8 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TMC1Q8TDI8 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
TMC1Q8TDI8 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TMC1Q8TDI8 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TMC1Q8TDI8 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
TMC1Q8TDI8 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC20.05■□□□□ 0.8
TMC1Q8TDI8 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TMC1Q8TDI8 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC20.05■□□□□ 0.8
TMC1Q8TDI8 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
TMC1Q8TDI8 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TMC1Q8TDI8 MBP-201ENST00000354542 575 ntTSL 2 BASIC20.05■□□□□ 0.8
TMC1Q8TDI8 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TMC1Q8TDI8 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TMC1Q8TDI8 MPV17-204ENST00000399052 749 ntTSL 4 BASIC20.05■□□□□ 0.8
TMC1Q8TDI8 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC20.05■□□□□ 0.8
TMC1Q8TDI8 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC20.05■□□□□ 0.8
TMC1Q8TDI8 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC20.05■□□□□ 0.8
TMC1Q8TDI8 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC20.05■□□□□ 0.8
TMC1Q8TDI8 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC20.05■□□□□ 0.8
TMC1Q8TDI8 RN7SL258P-201ENST00000478664 300 ntBASIC20.05■□□□□ 0.8
TMC1Q8TDI8 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC20.05■□□□□ 0.8
TMC1Q8TDI8 CFL1-214ENST00000534769 758 ntTSL 2 BASIC20.05■□□□□ 0.8
TMC1Q8TDI8 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC20.05■□□□□ 0.8
TMC1Q8TDI8 AC027237.1-201ENST00000560942 655 ntBASIC20.05■□□□□ 0.8
TMC1Q8TDI8 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC20.05■□□□□ 0.8
TMC1Q8TDI8 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC20.05■□□□□ 0.8
TMC1Q8TDI8 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TMC1Q8TDI8 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC20.05■□□□□ 0.8
TMC1Q8TDI8 LINC01783-202ENST00000614408 828 ntBASIC20.05■□□□□ 0.8
TMC1Q8TDI8 BX284668.2-205ENST00000619677 828 ntBASIC20.05■□□□□ 0.8
TMC1Q8TDI8 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
TMC1Q8TDI8 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC20.05■□□□□ 0.8
TMC1Q8TDI8 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
TMC1Q8TDI8 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TMC1Q8TDI8 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TMC1Q8TDI8 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TMC1Q8TDI8 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TMC1Q8TDI8 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC20.05■□□□□ 0.8
TMC1Q8TDI8 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TMC1Q8TDI8 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TMC1Q8TDI8 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TMC1Q8TDI8 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TMC1Q8TDI8 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
TMC1Q8TDI8 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
TMC1Q8TDI8 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TMC1Q8TDI8 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TMC1Q8TDI8 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TMC1Q8TDI8 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
TMC1Q8TDI8 HSPA7-201ENST00000445535 1927 ntBASIC20.04■□□□□ 0.8
TMC1Q8TDI8 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TMC1Q8TDI8 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TMC1Q8TDI8 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC20.04■□□□□ 0.8
TMC1Q8TDI8 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
TMC1Q8TDI8 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TMC1Q8TDI8 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC20.04■□□□□ 0.8
TMC1Q8TDI8 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TMC1Q8TDI8 MIR33B-201ENST00000385104 96 ntBASIC20.04■□□□□ 0.8
TMC1Q8TDI8 AL627231.1-201ENST00000394467 1125 ntBASIC20.04■□□□□ 0.8
TMC1Q8TDI8 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC20.04■□□□□ 0.8
TMC1Q8TDI8 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms