Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 KLK3-211ENST00000597483 810 ntTSL 2 BASIC14.89□□□□□ -0.03
PCDH19Q8TAB3 AC090386.2-201ENST00000623010 1039 ntBASIC14.89□□□□□ -0.03
PCDH19Q8TAB3 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC14.89□□□□□ -0.03
PCDH19Q8TAB3 DDX5-235ENST00000630471 473 ntTSL 4 BASIC14.89□□□□□ -0.03
PCDH19Q8TAB3 PCBP2-OT1-201ENST00000634357 590 ntBASIC14.89□□□□□ -0.03
PCDH19Q8TAB3 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC14.89□□□□□ -0.03
PCDH19Q8TAB3 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDH19Q8TAB3 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
PCDH19Q8TAB3 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.89□□□□□ -0.03
PCDH19Q8TAB3 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDH19Q8TAB3 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDH19Q8TAB3 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDH19Q8TAB3 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PCDH19Q8TAB3 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDH19Q8TAB3 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDH19Q8TAB3 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC14.89□□□□□ -0.03
PCDH19Q8TAB3 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC14.89□□□□□ -0.03
PCDH19Q8TAB3 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDH19Q8TAB3 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDH19Q8TAB3 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDH19Q8TAB3 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDH19Q8TAB3 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.89□□□□□ -0.03
PCDH19Q8TAB3 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDH19Q8TAB3 AC104581.4-201ENST00000623126 3052 ntBASIC14.89□□□□□ -0.03
PCDH19Q8TAB3 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
PCDH19Q8TAB3 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PCDH19Q8TAB3 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDH19Q8TAB3 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC14.88□□□□□ -0.03
PCDH19Q8TAB3 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDH19Q8TAB3 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
PCDH19Q8TAB3 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC14.88□□□□□ -0.03
PCDH19Q8TAB3 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDH19Q8TAB3 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
PCDH19Q8TAB3 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC14.88□□□□□ -0.03
PCDH19Q8TAB3 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
PCDH19Q8TAB3 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.88□□□□□ -0.03
PCDH19Q8TAB3 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PCDH19Q8TAB3 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PCDH19Q8TAB3 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PCDH19Q8TAB3 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PCDH19Q8TAB3 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
PCDH19Q8TAB3 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
PCDH19Q8TAB3 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDH19Q8TAB3 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDH19Q8TAB3 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDH19Q8TAB3 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDH19Q8TAB3 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PCDH19Q8TAB3 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDH19Q8TAB3 SMS-201ENST00000379404 1174 ntTSL 3 BASIC14.88□□□□□ -0.03
PCDH19Q8TAB3 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
PCDH19Q8TAB3 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PCDH19Q8TAB3 HNRNPA1P63-201ENST00000427917 963 ntBASIC14.88□□□□□ -0.03
PCDH19Q8TAB3 AC104306.2-201ENST00000451877 341 ntBASIC14.88□□□□□ -0.03
PCDH19Q8TAB3 TUBB8P8-201ENST00000458717 1058 ntBASIC14.88□□□□□ -0.03
PCDH19Q8TAB3 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC14.88□□□□□ -0.03
PCDH19Q8TAB3 PGAM1P5-201ENST00000548011 764 ntBASIC14.88□□□□□ -0.03
PCDH19Q8TAB3 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
PCDH19Q8TAB3 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC14.88□□□□□ -0.03
PCDH19Q8TAB3 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC14.88□□□□□ -0.03
PCDH19Q8TAB3 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC14.88□□□□□ -0.03
PCDH19Q8TAB3 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC14.88□□□□□ -0.03
PCDH19Q8TAB3 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC14.88□□□□□ -0.03
PCDH19Q8TAB3 AC005695.3-201ENST00000614522 232 ntBASIC14.88□□□□□ -0.03
PCDH19Q8TAB3 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDH19Q8TAB3 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PCDH19Q8TAB3 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDH19Q8TAB3 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDH19Q8TAB3 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PCDH19Q8TAB3 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDH19Q8TAB3 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDH19Q8TAB3 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PCDH19Q8TAB3 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDH19Q8TAB3 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PCDH19Q8TAB3 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC14.88□□□□□ -0.03
PCDH19Q8TAB3 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
PCDH19Q8TAB3 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC14.88□□□□□ -0.03
PCDH19Q8TAB3 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDH19Q8TAB3 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDH19Q8TAB3 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
PCDH19Q8TAB3 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDH19Q8TAB3 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
PCDH19Q8TAB3 CCT8L1P-201ENST00000465400 1674 ntBASIC14.87□□□□□ -0.03
PCDH19Q8TAB3 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDH19Q8TAB3 KRT8P29-201ENST00000420409 1371 ntBASIC14.87□□□□□ -0.03
PCDH19Q8TAB3 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
PCDH19Q8TAB3 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDH19Q8TAB3 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDH19Q8TAB3 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PCDH19Q8TAB3 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDH19Q8TAB3 RPS3-201ENST00000278572 907 ntTSL 3 BASIC14.87□□□□□ -0.03
PCDH19Q8TAB3 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
PCDH19Q8TAB3 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
PCDH19Q8TAB3 BCYRN1-201ENST00000418539 200 ntBASIC14.87□□□□□ -0.03
PCDH19Q8TAB3 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC14.87□□□□□ -0.03
PCDH19Q8TAB3 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC14.87□□□□□ -0.03
PCDH19Q8TAB3 AC006033.1-201ENST00000440505 426 ntBASIC14.87□□□□□ -0.03
PCDH19Q8TAB3 OR2R1P-201ENST00000441404 914 ntBASIC14.87□□□□□ -0.03
PCDH19Q8TAB3 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC14.87□□□□□ -0.03
PCDH19Q8TAB3 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
PCDH19Q8TAB3 ZNF767P-206ENST00000513792 565 ntBASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms