Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC13.54□□□□□ -0.24
ARHGEF39Q8N4T4 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC13.54□□□□□ -0.24
ARHGEF39Q8N4T4 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC13.54□□□□□ -0.24
ARHGEF39Q8N4T4 NAGK-204ENST00000443872 878 ntTSL 3 BASIC13.54□□□□□ -0.24
ARHGEF39Q8N4T4 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC13.54□□□□□ -0.24
ARHGEF39Q8N4T4 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ARHGEF39Q8N4T4 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC13.54□□□□□ -0.24
ARHGEF39Q8N4T4 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC13.54□□□□□ -0.24
ARHGEF39Q8N4T4 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
ARHGEF39Q8N4T4 AC134698.3-201ENST00000523880 214 ntBASIC13.54□□□□□ -0.24
ARHGEF39Q8N4T4 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC13.54□□□□□ -0.24
ARHGEF39Q8N4T4 AC012044.1-201ENST00000603431 297 ntBASIC13.54□□□□□ -0.24
ARHGEF39Q8N4T4 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
ARHGEF39Q8N4T4 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
ARHGEF39Q8N4T4 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
ARHGEF39Q8N4T4 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
ARHGEF39Q8N4T4 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ARHGEF39Q8N4T4 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ARHGEF39Q8N4T4 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
ARHGEF39Q8N4T4 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ARHGEF39Q8N4T4 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ARHGEF39Q8N4T4 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.54□□□□□ -0.24
ARHGEF39Q8N4T4 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ARHGEF39Q8N4T4 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
ARHGEF39Q8N4T4 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ARHGEF39Q8N4T4 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
ARHGEF39Q8N4T4 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.54□□□□□ -0.24
ARHGEF39Q8N4T4 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
ARHGEF39Q8N4T4 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
ARHGEF39Q8N4T4 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ARHGEF39Q8N4T4 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ARHGEF39Q8N4T4 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ARHGEF39Q8N4T4 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
ARHGEF39Q8N4T4 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ARHGEF39Q8N4T4 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
ARHGEF39Q8N4T4 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ARHGEF39Q8N4T4 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ARHGEF39Q8N4T4 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ARHGEF39Q8N4T4 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.53□□□□□ -0.24
ARHGEF39Q8N4T4 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.53□□□□□ -0.24
ARHGEF39Q8N4T4 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
ARHGEF39Q8N4T4 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
ARHGEF39Q8N4T4 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
ARHGEF39Q8N4T4 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ARHGEF39Q8N4T4 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
ARHGEF39Q8N4T4 KRT17P5-201ENST00000332088 839 ntBASIC13.53□□□□□ -0.24
ARHGEF39Q8N4T4 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
ARHGEF39Q8N4T4 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ARHGEF39Q8N4T4 RN7SL67P-201ENST00000492147 296 ntBASIC13.53□□□□□ -0.24
ARHGEF39Q8N4T4 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC13.53□□□□□ -0.24
ARHGEF39Q8N4T4 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC13.53□□□□□ -0.24
ARHGEF39Q8N4T4 RHOQP1-201ENST00000555758 579 ntBASIC13.53□□□□□ -0.24
ARHGEF39Q8N4T4 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC13.53□□□□□ -0.24
ARHGEF39Q8N4T4 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ARHGEF39Q8N4T4 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC13.53□□□□□ -0.24
ARHGEF39Q8N4T4 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ARHGEF39Q8N4T4 ELP5-212ENST00000574255 671 ntTSL 2 BASIC13.53□□□□□ -0.24
ARHGEF39Q8N4T4 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
ARHGEF39Q8N4T4 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
ARHGEF39Q8N4T4 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC13.53□□□□□ -0.24
ARHGEF39Q8N4T4 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC13.53□□□□□ -0.24
ARHGEF39Q8N4T4 AC009560.1-201ENST00000620208 434 ntBASIC13.53□□□□□ -0.24
ARHGEF39Q8N4T4 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ARHGEF39Q8N4T4 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
ARHGEF39Q8N4T4 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ARHGEF39Q8N4T4 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
ARHGEF39Q8N4T4 FAM90A2P-201ENST00000511144 1395 ntBASIC13.53□□□□□ -0.24
ARHGEF39Q8N4T4 FAM90A25P-201ENST00000528404 1395 ntBASIC13.53□□□□□ -0.24
ARHGEF39Q8N4T4 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
ARHGEF39Q8N4T4 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ARHGEF39Q8N4T4 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC13.53□□□□□ -0.24
ARHGEF39Q8N4T4 TBC1D3J-201ENST00000620719 1426 ntBASIC13.53□□□□□ -0.24
ARHGEF39Q8N4T4 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ARHGEF39Q8N4T4 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ARHGEF39Q8N4T4 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ARHGEF39Q8N4T4 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
ARHGEF39Q8N4T4 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC13.53□□□□□ -0.24
ARHGEF39Q8N4T4 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC13.53□□□□□ -0.24
ARHGEF39Q8N4T4 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
ARHGEF39Q8N4T4 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ARHGEF39Q8N4T4 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ARHGEF39Q8N4T4 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
ARHGEF39Q8N4T4 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC13.53□□□□□ -0.24
ARHGEF39Q8N4T4 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
ARHGEF39Q8N4T4 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.53□□□□□ -0.24
ARHGEF39Q8N4T4 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
ARHGEF39Q8N4T4 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
ARHGEF39Q8N4T4 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC13.52□□□□□ -0.24
ARHGEF39Q8N4T4 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ARHGEF39Q8N4T4 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ARHGEF39Q8N4T4 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ARHGEF39Q8N4T4 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
ARHGEF39Q8N4T4 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ARHGEF39Q8N4T4 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
ARHGEF39Q8N4T4 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ARHGEF39Q8N4T4 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
ARHGEF39Q8N4T4 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ARHGEF39Q8N4T4 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ARHGEF39Q8N4T4 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC13.52□□□□□ -0.24
ARHGEF39Q8N4T4 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC13.52□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms